Thalassospira tepidiphila: MACH01_06260
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Entry
MACH01_06260 CDS
T09750
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ttb03009
]
MACH01_06260
Enzymes [BR:
ttb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MACH01_06260
Ribosome biogenesis [BR:
ttb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MACH01_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BDW87859
LinkDB
All DBs
Position
complement(715835..717133)
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AA seq
432 aa
AA seq
DB search
MSDKNTTPDDNKPERIAKRIARSGVCSRRDAERMIAEGLVRLNGKKLDTPAVTVTDEDEI
IVDGKPLPEKEKPRLWRLFKKRGLVTSHRDEQGRDTVFEHLPSYVPRVISVGRLDLNSEG
LLLLTNDGELARYLELPATGWARRYRVRVHGQIDEAKLKQLEDGVTVDGINYGSIHAEVD
VQKGTNAWMTVTLREGKNREIRRVMEHLGWPVTRLMRVSYGPFQLGNLAPGECEEITGKV
MKEQLAAFFKGDYSKVSEKKSVARGGTSRPKAPRTVFGQPAQRKRPQGGPNAAAQNAEAD
EQRETRERPASGAARKGPRIGAAPRAGGRGKPASGGDRQERDMREERGSSRPTNKGRGRY
SAEGKAAGGRDGGRDGGRDSGRGTGGREGKPGFIEGRGRGKPSGKPAGRSGDTTHSAPGR
KPSGNRPRGKKD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagaacaccaccccggatgacaacaagcccgaacgcattgccaagcgcatt
gcgcgatctggtgtttgttccaggcgtgatgccgaacgcatgattgccgaggggctggta
cgcctgaatggcaagaagcttgatacgccagcagtcaccgtcaccgacgaagacgagatc
atcgttgatggcaagccgctgccggaaaaggaaaagccgcgtctttggcgcctgtttaaa
aagcgcggtctggtcactagccaccgcgatgaacagggccgcgacacggtgtttgaacat
ctgccaagttacgttccgcgcgtgatttcggtcggacgacttgatttgaactccgaaggg
ttgctgctgctgaccaatgatggcgagcttgcccgctatcttgaactgcccgcaaccggc
tgggcgcggcgctaccgcgtgcgcgtgcatggtcagatcgacgaggccaagcttaaacag
cttgaagacggtgttacggttgacggcatcaattacggctcaatccatgccgaggtcgat
gttcagaaaggcaccaatgcctggatgacagtgacgctgcgcgaaggcaagaaccgtgaa
atccgccgtgtcatggaacatcttggctggccagtcacgcgcctgatgcgtgtttcttat
ggcccgttccagttgggcaatctggcgcctggcgagtgcgaggaaattaccggcaaggtg
atgaaagaacagctcgctgcattctttaagggcgactattccaaggtttccgaaaagaaa
tcggttgcccgtggcggcacatcgcgcccgaaggccccgcgcaccgtgtttggccaacca
gcacagcgcaaacgcccgcaaggtggtccgaacgccgccgcccagaatgccgaggccgac
gaacagcgtgaaacccgcgaacgtccggctagtggtgctgcacggaaaggcccgcgcatc
ggtgctgccccgcgtgccggtggccgtggcaaaccggcttctggcggggatcggcaggaa
cgtgatatgcgcgaagaacgcggatcatcacgcccgaccaacaagggccgtggccgttac
agcgccgaaggcaaagctgccggtgggcgtgatggcggccgcgacggtggtcgtgatagc
ggacggggcactggcggccgcgaaggtaaaccgggcttcattgaaggacgcggtcgtgga
aaaccatccggaaaaccggctggtcgttccggcgataccacgcatagtgcgcccggtcgc
aagccgtccggtaaccgtccgcgcggcaagaaggactaa
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