Thalassospira tepidiphila: MACH01_11240
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Entry
MACH01_11240 CDS
T09750
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ttb03000
]
MACH01_11240
Transcription factors [BR:
ttb03000
]
Prokaryotic type
Helix-turn-helix
Other families
MACH01_11240
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_5
Mg_chelatase
AAA_2
HTH_30
HTH_23
HTH_7
AAA_16
AAA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BDW88357
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Position
1264789..1266690
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AA seq
633 aa
AA seq
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MSGNIPGGRIEAALQLSGGAQNRAVLESWQRCEQRFGLAHDTLRRPEVISESQTRQLRDR
NGRLYHHAHDLVRTLYRKIDASGYAVFLTDNSGVILDSVAAHSLLPSFRTNGLLPGAVWS
EEREGTNGIGTCIVEGRPITIHKDEHFLAQHSVLTCTAAPVFDPDGKVCSVLDVSAVRED
IKRPDCLRVRGMVADYADALERILFFDERAGDVIVHLHPDARHVGSTRDAMISIAPDGTI
SGATSTARRILAACDNSADIADMFEMDVDNLIAKLASPDGQGSSATPLNIAGGGVLFGSV
TIPQRMRRRYVGRSTPVARKAPSLPARRTTDIPDTDAALRRIFEIGTRLHARDINVLMSG
ETGSGKEYLARHIHDATLGKSKAFVAINCAALPEGLIENELFGHAGGAFTGAARDGFGGR
IREANGGTLFLDEIGDMPLAAQGRLLRVLESRTVEPLGSTKSVPVDFRLICASNVDLNAA
VAEGKFREDLLYRIKGARLAVPPLRERSDLADLIKRLLAALSDEYVACSDDVLALLTRHA
WPGNVRELINVLQYAAVFAEDGVIEPHHLPDDFVAMQDVAPPSPGQTIARAEADALRQVL
DDQQWHISNTAKALGIGRNTLYRRMARLGLNRR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaacattcccggcggacggatagaagcagccctgcagctgagcggcggggcg
caaaatcgtgcggtgcttgaaagctggcaacggtgtgaacaacgctttggtctggctcat
gacaccctgcgccgtcccgaagtcatatctgaaagccagacccggcaattgcgtgatcgc
aacgggcggctttatcaccatgcccatgaccttgtgcgcacgctgtatcgcaagattgat
gcatccggctatgcggtgtttctgaccgataatagcggtgtcatccttgatagtgttgcg
gcccattccctgttgccgtcgtttcgcaccaacgggcttttgcccggtgcggtctggagc
gaggaacgcgaaggcaccaatggcattggcacctgtattgtcgagggtcgcccgatcacc
atccacaaggatgaacatttcctggcccagcattcggttctgacctgcaccgcggccccg
gtgtttgatcccgatggcaaggtgtgctcggtcctggatgtatcggctgtgcgcgaagac
atcaaacgccccgattgcctgcgcgtgcgcggcatggtggccgattatgccgatgcgctt
gaacgtattctgttttttgatgaacgcgctggtgatgtgattgtccatctgcatcctgat
gcccgccatgtcggttcgacccgcgatgcgatgatttcgattgcgccagatggcacaatc
agcggggcgacatcgactgcgcggcgcattctggcggcgtgtgataattccgccgatatc
gccgatatgttcgagatggatgtcgacaatctgattgccaaactggcaagcccggacggg
cagggatcatcggcaaccccgcttaatatcgcgggcggtggtgttctgtttggcagtgtc
accatcccgcaacggatgcgccgccgttatgtcgggcgctcaacaccggtggcgcgcaag
gcgccatccctgccagcccgacgcacgactgatatccccgatacggacgccgcccttcgg
cgtatttttgaaatcggcacgcggcttcatgcgcgtgatatcaatgtcctgatgtcgggc
gaaaccggcagcggcaaggaatatctggcccgccacattcatgatgccacccttggtaaa
tcaaaggcgtttgttgcgatcaactgtgccgcccttcccgaaggactgattgaaaacgaa
ctgtttggtcatgctggcggcgcctttaccggcgcggcacgcgatggctttggcggtcgt
attcgcgaggccaatggcggcacgctgtttctcgatgaaatcggcgatatgccgctggcc
gcccaaggccgattgctgcgtgtccttgaaagtcgcacggtcgagccgcttggcagtaca
aagtccgtgccggtcgatttccgcctgatctgtgccagcaatgtcgatttgaatgcggcg
gtggccgagggcaagttccgcgaagacctgctttatcgcatcaagggcgcgcgccttgcc
gtgccgccgttacgtgaacgcagtgacctggctgatctgatcaaacggctattggcggcg
ttgtccgatgagtatgtcgcatgcagtgatgatgttttggcacttttgacccgtcacgct
tggccgggcaatgtgcgcgaactgatcaatgttttgcaatatgccgccgtctttgccgaa
gacggggtgattgaaccccatcatctgcctgatgatttcgttgcgatgcaggatgttgca
ccgccatcgccgggccagaccatcgcgcgcgctgaggccgatgccctgcgccaggtcctt
gatgatcagcaatggcacatcagcaacaccgccaaggcactgggcattgggcgcaacacg
ctttatcgccggatggcgcggcttgggctcaatcggcgttaa
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