Thalassospira tepidiphila: MACH01_13550
Help
Entry
MACH01_13550 CDS
T09750
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb02010
ABC transporters
ttb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MACH01_13550
03070 Bacterial secretion system
MACH01_13550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ttb02000
]
MACH01_13550
02044 Secretion system [BR:
ttb02044
]
MACH01_13550
Transporters [BR:
ttb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MACH01_13550
Secretion system [BR:
ttb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
MACH01_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_21
DUF7012
AAA_30
AAA_22
DUF3584
ABC_ATPase
DO-GTPase2
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
BDW88588
LinkDB
All DBs
Position
1519445..1521667
Genome browser
AA seq
740 aa
AA seq
DB search
MKEPQVLNAGLDTGVASLALVLAMQGYSSDPDQIKYDAGLGEAKLGSADILRLAKQYGAR
AKQITLTAKDFANATLPFIALMGDGSYVVVARQANDGRLLIRDPQQEKPVLVDQEAFLAE
FSGSALLIGRSKRAPDQDGALGPSQPFGFKWFLPLLKKHRAALSHAMAASLFIQIFALIT
PLFVMVIIDKVLSSGNMSTLDVLVIGLVAIAVFDLVIGGLRRYVFSLTTNKIDAELGAAV
FRHLTRLPMAYFSGKRTGDTVARIKELESVRAFLTGSALTVFVDFGFTAIFLIVMFGFAP
ILATIVVGFVAAIMIIYGLIGPFIKDKLQERFKDNADSQSLLVEAVSGMETVKALGIEPQ
MQRHWEDQVAARTDSAYGADKVSSATQQAAGFLNKVLIALTLWLGARMVMDGGMTAGQLI
AFNMLVGRVTAPVMRIAQLLQQLAQTKVALRRVADILDAAPEPGRNAKRSQMPRVSGGVK
FEHVTFRYAPDGPKILDDVSFDIKPGQVIGLVGVSGAGKTSLLRLIQRFYPIEGGRILID
GMDIAAADPAWLRRQIGAVLQDNFLFNRTVRENIAIAMPGMPMERVIAAAKLANAHEFIS
QLPQGYDTVIGERGGILSGGQKQRIALARALVTNPAILLLDEATSSLDSASERAIQTQMQ
AITKGRTVFVAAHRLSTLHHADRILVLDNGRLVESGAHADLLKLGGAYARLHAIQAGLNR
NADPDTASVKSTKKSQEAAE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacctcaggttcttaatgccggtttggatacgggggtggcgtcgttggctttg
gtgctagcgatgcaaggctattcttctgatccggatcaaatcaaatatgatgccggtttg
ggtgaagccaaactgggcagtgcagatatcctgcggcttgccaagcaatatggtgcgcgg
gcaaagcaaatcacgcttacggccaaggattttgcgaacgctactctcccatttattgcg
ttgatgggcgacggcagctatgtcgtcgtcgcgcgtcaggcaaatgacggaaggttgctt
atccgtgatccccagcaggaaaagccggtcctcgttgatcaagaagcctttcttgcagag
ttttcgggatcggcactgctgatcgggcgcagtaagcgagcaccggatcaggatggtgcg
ctcggcccaagtcagccattcgggtttaaatggtttcttccgcttcttaaaaagcatcga
gcggcgttgtcgcatgccatggcggcatcgcttttcatccagatatttgcgctgattaca
ccgcttttcgtcatggtgattatcgacaaggtgttgagttccggcaacatgtcgacgctt
gatgtgctggtgatcggccttgtcgccattgcggtatttgatctcgttattggtggtttg
cggcgttatgtcttctcgttaacgaccaacaagattgacgcagagttgggggctgctgtt
ttccggcacctgacccgtctgcccatggcgtatttttcgggcaagcgcaccggagatacg
gtcgcgcggatcaaggagcttgaatccgtccgtgcctttctgaccgggtcggcgctaacc
gtttttgtcgattttggatttactgcgattttcctgatcgtgatgtttggctttgcaccg
atcctggcaaccattgtggtcgggttcgtcgcggccatcatgatcatttatggacttatc
gggccattcataaaagacaagctgcaagagcgtttcaaggataatgcagactcccaatcc
ctgttggttgaggcggtttcggggatggaaactgtcaaggcgcttgggatcgaaccccag
atgcaacggcattgggaggatcaggttgcagcccgtacagattctgcttacggcgcggac
aaggtaagctccgccacacagcaggcggcagggttcctcaataaggtgctgattgccctg
accctttggcttggcgcgcgcatggtcatggatggtgggatgacagccgggcagttgatt
gcgtttaacatgctggttggtcgcgtaaccgcacccgtgatgcgcattgcccaacttctt
caacaacttgcgcaaaccaaggttgccttgcggcgcgtggcggacattcttgacgctgcg
ccggaaccgggacgaaatgccaagcggtctcaaatgccccgcgtttcgggtggcgtgaag
tttgaacatgtcacgttccgctatgcgcccgatggtccaaaaatccttgatgatgtcagt
tttgatatcaagccgggacaagtgatcggtctggttggcgtatcgggtgcgggtaaaaca
tcgcttttgcgactgatccagcgtttctacccaattgaaggcggtcgtattctgatcgac
ggtatggatatcgccgctgctgatcctgcctggcttcgtaggcaaattggcgctgtgctg
caggacaacttcctgtttaaccgaaccgtgcgtgaaaacatcgcaattgccatgcccggt
atgccgatggagcgtgtgattgctgccgccaaactcgcaaatgcgcatgagttcatcagt
caactgccacagggctatgatacggtgatcggggaacgcggtggcattctgtctggtgga
caaaaacaacgcattgccttggcgcgtgcattggtcaccaatccggcaatcctgttgctg
gacgaagccaccagttcgcttgatagcgcgtcggagcgtgccatccagactcaaatgcag
gctatcacaaaggggcgtaccgtgtttgtcgcagcccatcgtctttcaaccttgcaccat
gctgaccgcattctcgtgctggataacgggcgcttggtcgaaagcggggctcatgcggat
ctgcttaagcttggtggggcctatgcgcgcttgcatgccatccaggccgggttaaaccga
aatgctgatccagatacggcttcggttaagtcgaccaaaaaatcacaggaggcggcagaa
tga
DBGET
integrated database retrieval system
