Thalassospira tepidiphila: MACH01_15420
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Entry
MACH01_15420 CDS
T09750
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttb03032
]
MACH01_15420
03036 Chromosome and associated proteins [BR:
ttb03036
]
MACH01_15420
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_15420
DNA replication proteins [BR:
ttb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MACH01_15420
Chromosome and associated proteins [BR:
ttb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MACH01_15420
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MACH01_15420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BDW88775
LinkDB
All DBs
Position
1746194..1746466
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLVGSVAAKADLSKADAAKAVDAVFDSITDSLKSGDEVRLVGFGTFAVAARAASKG
RNPRTGEEIDIPASKQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaacgatctcgttggaagtgtagctgctaaagctgatctgtccaaagctgac
gctgccaaggcagtagacgctgttttcgattccatcaccgattctctgaaatccggcgac
gaagttcgtctggttggtttcggtaccttcgctgtcgctgctcgcgctgcttcaaaaggt
cgcaacccgcgcaccggtgaagaaatcgacatcccggcatcgaaacagccgaagttcaag
gctggtaaaggccttaaggacgccgtcaactaa
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