Thalassospira tepidiphila: MACH01_16180
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Entry
MACH01_16180 CDS
T09750
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH01_16180 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttb03019
]
MACH01_16180 (recQ)
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_16180 (recQ)
Enzymes [BR:
ttb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MACH01_16180 (recQ)
Messenger RNA biogenesis [BR:
ttb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MACH01_16180 (recQ)
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MACH01_16180 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDW88851
LinkDB
All DBs
Position
complement(1828454..1830286)
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AA seq
610 aa
AA seq
DB search
MPDLLDRPVQRQPIDVLQEVFGYDSFRGQQAEIIDHVIAGNDALVLMPTGGGKSLCYQVP
ALCRPGTAVVVSPLIALMKDQVDALNQLGVKAAFINSTLAPDAAREIETRAVDGDIDLLY
VAPERFASDRFLNLLDRISISLFAIDEAHCVSQWGHDFRPEYRRLDLLPTRFAHVPRIAL
TATADTPTRKDIAENLHLTDAQCFITGFDRPNITYRIETKGNAKQRLLSFLNREHAEDAG
IVYCLSRRKTEDVAQWLSENGRPALPYHAGLAQETRQLHQDRFLREDGLIICATVAFGMG
IDKPNVRFVAHLNLPKSMEAYYQETGRAGRDGLPANAWMNYDLSDIVSIRSMVAGSDAPE
AQKRIESRKLDALVGLAETTRCRRQVILSYFGEDRHEPCGNCDTCLEPVDTWDATQASRK
ALSAVYRTGQRFGPAHVIEVLMGRKTEKIRQNGHDKLSVYAIGKDIAQPQWRSVFRQLLA
MGYLEVDVEGHGGVYLTEESRPVLRGEKVVEMRKDPGESKRAMTKRLRDFDTEFENEEDR
DLWERLRTLRRELATSQNVPPYVIFSDRTLWEMVRFKPRTLEDMASINGVGVKKLDQYGL
AFLDVMDGRR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccttctcgaccgacctgtacaacgtcagccgattgacgttctgcaagaagtg
ttcggctatgacagctttcgtggccaacaggctgaaatcattgaccatgtcatcgctgga
aatgacgcacttgtcctgatgccaaccggtggcggcaagtcgctttgctatcaggtgcca
gccctctgtcgtccgggaacggctgttgtcgtgtccccgctgatcgcgttgatgaaggat
caggtcgatgcgcttaatcagctgggcgtcaaagccgcctttatcaattcgacccttgcc
cccgatgccgcgcgcgaaattgaaacgcgtgccgtcgatggtgatatcgatcttctctat
gtggcgccggaacgttttgcttctgaccggttcttgaacctgctcgaccggatcagcatt
tcactgttcgcgattgatgaagcccactgtgtgtcgcaatggggccatgatttccgcccg
gaatatcgccgccttgatttgctgccaacgcgctttgcccatgtgccgcgcattgccctg
accgcaacggccgatacgcccacccgcaaagacattgccgaaaacctgcatctgaccgat
gcacagtgctttattaccggttttgaccgcccgaacatcacctatcgcattgaaaccaag
ggcaatgccaagcaacgcctgctgtcgttccttaatcgcgaacatgccgaggatgccggg
attgtctattgcctgtcacgacgcaaaaccgaagacgtcgcgcaatggctttcggaaaat
ggtcgaccggccctgccgtatcacgcgggtctggcacaggaaacacgccaacttcatcag
gaccgtttcctgcgtgaagacgggctgatcatctgtgccactgtggcctttggcatgggg
atcgacaaacccaatgtccgctttgtcgcccatctcaatctgcccaaaagcatggaagcc
tattatcaggaaaccgggcgtgccgggcgtgacgggctgccggccaatgcgtggatgaat
tacgatctgtccgatatcgtttcgatccgaagcatggtggccggttccgacgcccccgaa
gcccagaaacgcattgaatcgcgtaaactcgatgcgctggttggtcttgcggaaacgacc
cgttgccgccgtcaggtgatcctgtcctattttggtgaagatcgccacgagccgtgcggc
aactgcgacacctgccttgaaccggttgatacttgggatgcaacccaggcctcgcgcaag
gcgctgtcggcggtttatcgcaccggtcaacgttttggcccggcgcacgtgatcgaagtc
ctgatgggtcgcaagaccgaaaaaatccgccaaaacggccatgacaagctttcggtctat
gccattggcaaggatatcgcccagccgcaatggcgctcggtcttccgacagctccttgcc
atgggatatctcgaagtcgatgtcgaaggccatggtggcgtctatctgaccgaggagtcc
cgaccggttctgcgcggcgaaaaagtcgtcgaaatgcgcaaggaccccggcgaaagcaaa
cgcgccatgacaaagcgtctgcgcgatttcgatacagagttcgaaaacgaggaagaccgc
gatctttgggaacgtttacgcacgctccgccgcgaactggcaaccagccaaaacgtgccg
ccctatgtgatcttcagtgaccggacactttgggaaatggtgcgtttcaagccccgcacc
cttgaagatatggcatccatcaacggtgtcggcgtcaaaaagcttgatcagtacggattg
gcatttcttgatgtcatggacggacggcggtaa
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