Thalassospira tepidiphila: MACH01_16220
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Entry
MACH01_16220 CDS
T09750
Name
(GenBank) hypothetical protein
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MACH01_16220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttb03021
]
MACH01_16220
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_16220
Enzymes [BR:
ttb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MACH01_16220
Transcription machinery [BR:
ttb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MACH01_16220
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MACH01_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Chalcone_2
T9SS_plug_1st
Motif
Other DBs
NCBI-ProteinID:
BDW88855
LinkDB
All DBs
Position
1832498..1832830
Genome browser
AA seq
110 aa
AA seq
DB search
MARVTVEDCVDKIPNRFELVMLAAQRARNISAGAELTIDRDNDKNPVVALREIAEVTVDF
DDLRNGMVQGLQRHVEADEPEETEDDFGPKLVAEAVEEASAGVVAPSEEE
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttaccgtcgaagattgcgttgacaagattccgaaccgctttgagcttgta
atgcttgcagctcagcgtgcacgcaacatctcggccggtgcagaactgaccattgatcgt
gacaacgacaagaacccggttgttgcgctgcgtgaaatcgccgaagtaacggttgatttt
gacgatctgcgcaatggcatggtgcagggtctgcagcggcatgttgaagccgatgagccg
gaagaaaccgaagacgatttcggtccgaaactggttgctgaagctgttgaagaagcttcc
gctggcgttgttgctccgtcggaagaagaataa
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