Thalassospira tepidiphila: MACH01_17800
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Entry
MACH01_17800 CDS
T09750
Symbol
rpoH_1
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttb03021
]
MACH01_17800 (rpoH_1)
Transcription machinery [BR:
ttb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MACH01_17800 (rpoH_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
GntR
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
BDW89013
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Position
complement(1989806..1990675)
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AA seq
289 aa
AA seq
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MSAIKLPAVSQEEGFSGYLREVWKFPMLTADEEYMLAHRYQDHDDTEAAHKLVTSHLRLV
AKIAFGYRGYGLPMADLVAEGNTGLMRAVQKFDPERGFRLSTYAMWWIRAAVTEYILQSW
SMVKLGTMAAQKKLFFSLRKAKRQLNIYDNGELSPEEADQVAEKLGVTGREALEMNRRLA
ARDFSLNTPMPKDEGMEYLDTLSSDAPSPEALVADAEERVLHNGMLKNALGELPEREQEI
IKARFLSDDPITLEKLGERFGVSRERVRQLEARAFKKIQESVLTQHSAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattaaattacctgctgtttcccaggaagagggtttctcgggctatctccgt
gaagtctggaaattcccgatgcttacagcggacgaagaatacatgttggcccaccgttat
caggaccatgatgacaccgaggccgcccacaaacttgttaccagtcacttgcgtcttgtt
gccaaaatcgcgtttggttatcgcggctatggcctgccgatggcggaccttgtcgcggag
ggcaataccggcctgatgcgtgccgtgcagaagttcgatccggaacgtggtttccgcctg
tcgacctatgcgatgtggtggatccgtgctgcggtgaccgaatatatcctgcaaagctgg
tcgatggtcaaactcggcactatggcagcgcagaagaaactgttcttcagcctgcgtaaa
gccaagcgtcagcttaacatttatgacaatggtgaactttcgccagaggaagctgatcag
gttgccgaaaaacttggtgtgaccggtcgtgaagcgcttgaaatgaaccgccgtcttgcg
gcgcgcgatttctcgcttaacacgccgatgccgaaagacgaggggatggaatatctcgat
accctatcgtctgacgcaccaagcccggaagcactggttgccgacgccgaagaacgtgtt
cttcataacggcatgctgaaaaacgcacttggcgaattgcctgaacgtgaacaggaaatc
atcaaggcccgtttcctcagcgatgatccgatcacgctggaaaagcttggtgaacgtttc
ggcgtcagccgtgaacgcgtccgtcaacttgaagcacgcgcgttcaagaaaattcaggaa
agcgtcctgacgcagcattcagcggcataa
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