Thalassospira tepidiphila: MACH01_18220
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Entry
MACH01_18220 CDS
T09750
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MACH01_18220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_18220
Enzymes [BR:
ttb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MACH01_18220
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MACH01_18220
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BDW89055
LinkDB
All DBs
Position
2034089..2034868
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AA seq
259 aa
AA seq
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MKIATWNVNSIKARLPNILDWLQDGKPDVVLLQETKTVDDAFPAMEIEDLGYNIAIHGQK
TYNGVAILSKFPIEDVERGLPGNDDDEQARYIEATIGSNRPVRVASIYVPMGTAVGDEKF
DYKLNFLDRLITRFEKIRASGDAAVMGGDYNIAPDDMDVYDPVKLRETVLCTTVERKRLR
TMMNMGFTDAFRTFNPKGHQYSWWDYRAGAWNKDNGLRIDHLLLTPAAADRLSASDIDRE
PRGKEKASDHTPVWCMIDD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacctggaatgtgaactcgatcaaggcacgcctgccaaacattcttgac
tggctgcaggacgggaaacccgatgtggtcctgttacaggaaaccaagacggttgatgac
gcgtttccggcgatggagatcgaggatcttggctacaacatcgccattcatggtcaaaag
acctacaacggcgttgcgatcctttccaaattcccgatcgaagatgtcgaacgcggcctg
cccggcaacgatgatgacgaacaagcccgctatatcgaggcaaccatcggctcaaatcgt
ccagtccgggttgcatcgatctatgttccaatgggaacggctgttggcgacgagaagttt
gattacaaactgaacttcctggatcgcctgatcacccggtttgagaaaattcgtgccagt
ggtgacgccgctgtcatgggcggcgattacaacatcgcgcccgacgacatggacgtctat
gacccggtgaaactgcgtgaaacggtgctgtgcacgacggttgagcgtaaacgtttgcgc
accatgatgaatatgggctttaccgacgcattccggaccttcaacccgaaaggtcatcaa
tatagctggtgggactatcgcgccggtgcctggaacaaggataacggtcttcgtattgac
cacctcctcctgaccccggcggcggcagaccgactgagcgcatcggatatcgaccgggag
ccacgcggcaaggaaaaggcatctgatcacacaccggtctggtgcatgattgacgactga
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