Thalassospira tepidiphila: MACH01_25000
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Entry
MACH01_25000 CDS
T09750
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb00250
Alanine, aspartate and glutamate metabolism
ttb00310
Lysine degradation
ttb00350
Tyrosine metabolism
ttb00650
Butanoate metabolism
ttb00760
Nicotinate and nicotinamide metabolism
ttb01100
Metabolic pathways
ttb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MACH01_25000 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MACH01_25000 (gabD)
00310 Lysine degradation
MACH01_25000 (gabD)
00350 Tyrosine metabolism
MACH01_25000 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
MACH01_25000 (gabD)
Enzymes [BR:
ttb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
MACH01_25000 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
MACH01_25000 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
MACH01_25000 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BDW89733
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Position
complement(2748786..2750336)
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AA seq
516 aa
AA seq
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MSAATRNNSPSASSAPDPQANDTLIREGRARARGLIRDWNLKHAYINGEWRAADSRETLD
VIDPAKGDVIGTVPFMRTSEARQAIDAAHAAFAAWSRMLARERADILRRWRDLLEAHQED
LAALITLEQGKPLDQALREVVGAIAYAEWYGEEAKRAYGQTMPATQRDRRVVVQKHPVGV
VAAITPWNFPLTMVVRKCAPALAAGCTVIVKPAEDTPLSALAAAKLAEQAGFPPGVFNVV
TGLPHPIGEALTGDQRVRMLSFTGSTSVGKRLMEQCAPTMKKLSLELGGNAPFIVMDDAD
LDAAVAGAMISKFRNSGQTCVCANRIFVQDGVYDAFVEKFVAASKAQTIGNGFVPGTELG
PLINRQAVAKVERLVADAKKRGANLIYGAPLPDEGFFTRPLVMTDVPDDADCFDEELFAP
VAPIYRFGTEDDVITLANRVRTGLSSYIYSRDIGRIQRLADRLEVGVVGINDGTTSHEGA
PFGGVKESGQGREGGHWGLEEYLEPKYLNYALKSGI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgccacccggaataattcaccctccgcatcatccgccccggatccgcaggcc
aatgacaccctcattcgcgagggacgcgcgcgtgcacgtggccttatccgggactggaac
cttaagcacgcctatatcaacggtgaatggcgggcggccgacagtcgtgaaacgctggac
gtgatcgacccagccaagggggacgtgattggcacagtgccatttatgcgcacatccgag
gcccggcaggcaattgatgcggcccacgcggcctttgcggcatggtcgcgcatgctggca
cgcgaacgcgcggatatattgcgccgctggcgtgacttgcttgaagcccatcaagaagac
ctagctgccctgattacccttgaacagggaaaaccgcttgatcaggcgcttcgcgaagtg
gtcggtgcgattgcctatgccgagtggtatggcgaagaagccaagcgcgcctatggccaa
accatgcccgcaacccagcgcgatcgtcgcgttgttgtgcaaaaacaccccgtaggtgtg
gtcgcggcgatcacgccctggaattttccgctgaccatggtggtgcgcaaatgtgcgccc
gccttggcggcgggctgtaccgtgattgtcaaaccggccgaggataccccgctttcggca
ttggcagccgccaagctggccgaacaggccggttttccgcccggcgtgtttaacgtcgtg
accggtcttccccacccgataggcgaggccctgacaggcgatcagcgtgttcggatgttg
tccttcaccggttcaacctcggtgggcaaacggttgatggaacagtgcgcgccgacgatg
aaaaaactgtcgctggaacttggcggtaatgcgccttttatcgtcatggatgatgccgat
cttgatgcggccgttgctggcgcgatgatttcaaagttccgcaacagtggccagacctgc
gtttgtgccaaccgcattttcgtccaggacggtgtctatgatgcctttgtcgaaaagttc
gttgccgccagcaaggcacagaccatcggcaatggatttgtgcccggcacggaattgggg
ccgttgatcaaccgccaggcggtggcgaaggtcgaacgccttgtcgctgatgccaaaaaa
cgcggtgcaaacctgatttatggcgcgcccttgcccgacgaaggctttttcacccggcca
ctggtgatgaccgacgtgcccgatgatgcggattgctttgacgaggaactgtttgccccg
gtggccccgatctatcggtttggcaccgaagatgacgtgatcacacttgccaatcgggtg
cgcaccggactgtcttcttatatctacagtcgcgatatcgggcgtatccaacggcttgcc
gatcgtctggaagtcggggtggttggcatcaatgatggcaccaccagccacgaaggtgcg
ccgtttggcggggtcaaggaaagtggtcagggccgcgaaggcggtcattgggggcttgag
gaatatctagagcccaaatacctcaattacgcccttaagtcgggcatctga
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