Thalassospira tepidiphila: MACH01_35280
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Entry
MACH01_35280 CDS
T09750
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_35280
Enzymes [BR:
ttb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MACH01_35280
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MACH01_35280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDW90761
LinkDB
All DBs
Position
complement(3918325..3921789)
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AA seq
1154 aa
AA seq
DB search
MTEMRGTDPNVLQRNASDPTASVWVSASAGAGKTKVLSDRVLRLMLSGTEPHRILCLTFT
KAAAAEMANRVNERLGLWATMEDRDLQADLANLAGAAPSADETIRARQLFARVLDAPGGM
KIQTIHAFCQSLLRRFPLEAGLAPHFEIMDDRTAAETMADVQEEVLAFARTGRDDDLAHA
LSVVTGQVREGAFGEVMSELARERGRLKRMLANLGGAKRMRDAVYKALGVPIGLDDETIL
TKALYDDAFDRIGLMRGLAALEAGTKTDTARVPALAQFLEKTNVEDRLAVFNEYRSVFFT
TAGEPRAKLITKAAAENHPMGADALEQECARLVEVDRQRKAAAMAGATSALITIGNAMLD
RYATKKALHARLDYDDLILTSLQLLQRQAGIAGWVLFKLDEGLDHVLIDEAQDTNPEQWE
VVRILAEEFFIDAGRHADKPRTIFAVGDAKQSIYSFQRADPEKFAEMRRYFRERAREIAA
DWREVPMNISFRSTDAVLGTVDRVFAGPVARQGVGDDGEDVQHSPFRVGQAGRIELWPAV
EPEERAPEDPWTPPTRIVRLEDPEIRLARVIAGRIRHAIDEKEILTSRGRPVRAGDFMIL
VRRRTAFVDEVVKALKERNVPVAGVDRMQITDQLAVMDLVAFGRFLLMPEDDLTLAEVLK
SPLIGLDDDQLFEIAHNRPRTLWHALREKAALVEDGSPFARAYAFLFKWLGRVDYERPFE
LYAELLGGRGEEARGVRARLVGRLGIEANDPIDEFLNLAMGYEADHAPTLQGFLHWLMAG
DAEIKRDLEQSGRDEVRIMTVHGAKGLQAPIVFLPDTMQVPTQAPNLFWQEDRNLMFWLP
RVALETDLVARLRDDIALKRDQEYNRLLYVALTRAEDRLYICGWQGRRKAPEHCWYNLCS
QAMEGYAKPAQIDLSTYSGSGWEGEGWVWETDQSQAPKPDRTDDVSDSKQSAKRQLIRAV
APEESFPPKPLAPSRPLEDEPAVQSPLGGDQGQSFKRGLLIHKLLELLPDLPEQARRKAA
ERFLAQPIHALDPDLQAEIANETLGIFDNPDFAPVFAPGSRAEVPLVGIVGGDVVSAQID
RLVVRDDEVMIVDYKTNRPPPRDVEDTPRAYRRQMSIYRAALAQMYPGKKVRCFILWTNG
PWMVELPDHILTFG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatgcgcggaactgatcccaacgtcctgcaacgcaatgcatccgatccgaca
gcatcggtctgggtgtcggcgtcggcaggcgccggcaagaccaaggtgctgtctgatcgc
gtcttgcgcctgatgctttcgggcaccgagccacatcgtatcctttgtctgaccttcacc
aaggccgcggcggccgagatggccaaccgtgtgaatgaacgattgggtctgtgggccacg
atggaggatcgcgaccttcaggccgatctcgccaatcttgccggtgcagcacccagtgcc
gatgaaaccatccgcgcgcgccagctttttgcccgtgtgctggatgcaccgggcggaatg
aagatccagaccattcatgccttctgtcagtcgcttttgagacgttttccactggaagcc
ggtctggcgccgcattttgaaatcatggatgaccgcacagccgctgaaaccatggccgat
gtgcaggaagaggtcctggcattcgcccgaaccggccgtgatgatgacctggcccatgcc
ctgtcggtcgtcaccggacaggtccgcgagggtgcttttggggaagtcatgagcgagctt
gctcgcgaacgtggtcgcctgaagcgcatgctggccaatctgggcggggccaaacgcatg
cgcgatgcggtctataaggcgcttggcgtgccgatcggactggatgatgaaaccatcctg
accaaggccctctacgatgatgcctttgaccgcattgggttgatgcgggggctggcagcg
cttgaggccggaaccaaaaccgataccgcgcgcgtgccggcattggcgcaatttcttgaa
aagacgaatgtcgaagaccgtctggcggtatttaacgaatatcgcagcgttttcttcacc
acggccggtgaaccgcgcgccaaactgatcaccaaggctgctgccgaaaatcacccgatg
ggggccgatgcgcttgaacaggaatgcgcgcgtctggtcgaggttgatcgccaacgcaag
gccgccgccatggctggtgcgacatcagcgctaatcaccataggcaatgcgatgcttgat
cgctatgccaccaaaaaggccctgcatgcccgtcttgattatgatgacctgattctgaca
agtttacagttgctgcaacgtcaggccgggattgccggttgggtgttgttcaaactggac
gaaggccttgatcacgttctgattgacgaggcgcaggataccaacccagaacagtgggaa
gtggtgcgtattctggccgaggaattctttatcgatgccgggcgccatgccgataagccg
cgcaccatctttgccgttggggatgcgaaacaatcgatctatagcttccagcgcgccgat
cccgaaaaattcgccgaaatgcgccgttacttccgcgaaagggcgcgtgaaattgccgcc
gactggcgcgaagtaccgatgaacatctcgttccggtccaccgatgcggtgctgggcacg
gtggatcgtgtctttgccggtccggtggcacggcaaggcgtcggtgatgacggggaagac
gtgcagcacagtccattccgtgtcggacaggccgggcggattgagctgtggccagcggtt
gaacccgaagagcgcgcacccgaggacccatggacaccgccaacccggattgtccgcctt
gaagatccggaaatccgccttgcccgcgtcattgccgggcgcatccgccatgcgattgat
gaaaaggaaatcctgacatcgcgtggccgtccggtgcgcgcaggtgacttcatgatcctt
gtgcgccgtcgtaccgcctttgtcgatgaggtcgtcaaggcacttaaggaacgcaacgtt
ccggtcgccggtgttgaccgcatgcaaatcaccgatcagcttgcggtgatggatctggtg
gctttcggtcggttcctgttgatgcccgaagatgacctgacactggccgaggtgcttaaa
agcccgctgatcgggcttgatgacgatcaattgtttgaaattgcccataaccggccgaga
accctttggcatgcgctgcgtgaaaaggcggctttggttgaagacggatcaccgtttgcg
cgtgcctatgcctttttgttcaagtggctgggccgggttgattacgaacgcccgtttgaa
ctttatgccgaattgctgggcggtcgtggtgaggaagcgcgtggtgtccgtgcccgtctg
gttggtcgtctggggatcgaggcgaacgacccgattgacgaattcctcaacctcgcgatg
ggctatgaagctgatcatgcaccgacgcttcagggctttctgcactggctgatggcgggc
gatgcagagatcaagcgtgaccttgaacaaagcgggcgtgatgaagtccgcatcatgacc
gtgcatggtgccaaggggcttcaggcccccattgtgttcctgcccgataccatgcaggtg
ccgacacaggccccgaacctgttctggcaggaagaccgcaatctgatgttctggttgccg
cgtgtggcgcttgaaaccgatcttgttgcgcgcctgcgcgatgacatcgcacttaaacgc
gatcaggaatataaccggctgctctatgtcgccctgacacgcgcggaagaccggctttac
atttgtggctggcaggggcggcgcaaggcccccgaacattgctggtacaacctgtgtagc
caagcgatggaaggttacgccaaaccagcccagattgatctttcgacctattccggatcg
ggatgggagggggaaggctgggtctgggaaaccgatcaaagtcaggcgccgaaaccagac
cggactgatgatgtttcggattcaaaacaatctgcgaaacgtcagttaattcgggccgtt
gcgccagaagaatccttcccccccaagccactggcccccagtcgaccgcttgaagacgaa
ccggctgttcaatcgcccctgggtggcgatcagggacaaagcttcaagcgtggtcttctg
atccataagcttttggaacttctgccagacctgccagagcaggcccgccggaaggctgcg
gaacgcttccttgcccagccaattcatgcgcttgatcccgatctgcaggccgaaatcgcc
aatgaaacgttgggcattttcgataatccggacttcgccccggtctttgcgccgggatcg
cgggccgaggtgccattggttggtattgtcggcggggatgtggtttcggcccagattgac
cggcttgtcgtgcgcgatgatgaagtgatgattgtcgattataaaacaaatcgtccgccg
ccccgcgatgtcgaagacacgccgcgtgcctatcgtcgccagatgtcgatctatcgcgcg
gccttggcgcaaatgtatccgggcaaaaaggtcaggtgtttcattctctggaccaacggg
ccgtggatggtagagttgcccgatcacattctgacttttggttag
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