Thalassospira tepidiphila: MACH01_35290
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Entry
MACH01_35290 CDS
T09750
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_35290
Enzymes [BR:
ttb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MACH01_35290
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MACH01_35290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
T3SS_ATPase_C
Motif
Other DBs
NCBI-ProteinID:
BDW90762
LinkDB
All DBs
Position
complement(3921786..3924938)
Genome browser
AA seq
1050 aa
AA seq
DB search
MADLFDYMDAPEYDEASFAGEATPPSNLFFIPPGVAFADLIAKQLMAETADQPDTLPDYV
LMVPNRRSAKVMRDAFLRQSQGAVTLLPTIRPLGEADEDELAIYGAGGEQAALDLPPAIP
DLQRKLLLTQLIMGRPDHRGEKPTADQAARLAGELARFLDQVQTENCAFDDLKGLVPEEF
AEHWQLTLEFLQILTIHWPGILAAQDVSDRAMRRNALIAAQIDLWEENPPETPVLIVGST
GPFPALRDLMAAVLRMPQGRVVLPGLMAGLSHEDWAAIADDAAHPQHLLGKTLGHIGRHA
DSVLPWPALDPENDATIERRRLAREALRPAKTTHHWRHITGFSPDVMDGVLRVDCSGARE
EATTIALMMREALEHPEKTCALVTPDRGLARRVATELRRWEVEIDDSAGIPLHDTAPAIY
LRLVVRAVQEEFAPVPLLELLKHPLSAAGLSPESFRVLTRLLEKEVLRGARPGPGLDGLQ
TALDGWCEDTVARLSASGADSAIGRIERIRDDHARLSELVERIKACLDPIDDLTGDKTHA
PVHLLRSHVTAAEALAASDTQTGADRLWRGEAGEALADFVHELLNALTDFAPMPGNRYSA
FLDALMADRAVRPRYGKHPRLFIWGTVEAQMQKADLTILGGLNEGVWPPEAGADPWMSRP
MRRNFGLPAPEYRVGQSAHDFQQLFCSPDVVMTRALRIEGTPTVPSRWLLRIENILRKSR
VSMEKPDAAEWRALADLIDEPALSMRIKIGRPAPKPPVSARPDRLSVTQIETWMRDPYAI
YARHILGLRKLDGIDEDPGAADYGNLIHDALDQFIARHPENLPPDGEHELLIIGREVFKP
LAARPGLWAFWWPRFERIAKWFIQTEAARRDAVRKSYTEQSGTLDTSSGFQVYARADRID
QLRDGGIAIIDYKTGAPPSQGDVANGFAPQLPLEAAIAEKGGFGDVPAGSPASMAFWKLS
GGDPAGEIVEINTGRMKTTPAELAHAAVDGVNGLAAAFADPDTPYLSVPHPDHAPKYSDY
VHLARLREWMGSEDIEVLDDVDNGGEGDAS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctgtttgattacatggacgcgcccgaatatgacgaagcttccttcgcgggg
gaggcaacgccgccctcaaacctgtttttcattccacccggtgttgcctttgccgatctg
atcgccaaacaactgatggcggaaaccgccgatcagccagataccttgcccgactatgtc
ctgatggtgcccaaccggcgttccgccaaggtgatgcgcgatgcctttttgcggcaatca
cagggtgcggttacgttgcttccgaccattcgtccgctgggcgaggccgacgaggatgaa
ttggcgatttatggtgcgggtggtgaacaggcggcccttgatctgccgcccgccatcccc
gatctccaacgtaaattgctgctcacccagctgatcatggggcgccccgatcatcgcggt
gaaaagccaaccgccgatcaggccgcccgtcttgccggcgaactcgcacgctttcttgat
caggtgcaaactgaaaactgcgcttttgacgaccttaagggcctggtccccgaagaattc
gccgaacactggcagctcacccttgaattcctgcaaatcttgaccattcactggccgggt
attctggcggcacaggatgtcagtgaccgggccatgcggcgcaatgccctgattgccgcg
cagatcgatctatgggaagaaaacccgcccgaaacgccggtgctgattgtcggctcaacc
ggccctttccccgctttgcgggatttgatggcggcggtgcttagaatgccgcagggtcgg
gtggttctgcccggtctgatggcggggctcagtcacgaagactgggcggcgattgccgat
gatgccgcccatccacagcatcttctgggcaagaccttgggccatattggtcgccatgct
gacagtgtgctgccttggccggcccttgatcccgaaaacgatgccacgattgagcgccgc
cgtctggcccgcgaggcattgcgacctgccaaaaccacccatcactggcgccatatcacc
ggatttagcccggatgtgatggatggcgttttgcgtgtggactgttctggtgcgcgtgaa
gaggcaaccaccattgctcttatgatgcgtgaggccctggagcatcctgaaaagacctgc
gcactggtcaccccggatcgtggccttgcccggcgtgtcgccaccgaactgcgccggtgg
gaggttgaaattgatgattcggccggaatcccgctgcatgacacggcaccggcgatttat
ctgcgccttgtggtgcgggcggtgcaggaagaatttgcccctgttccattgctggagttg
ctgaaacatccgctctcggcggcgggtctgtcaccggaaagcttccgggttctgacccga
ttgcttgaaaaggaagttctgcgcggtgcccgtccgggtccgggactggatggtttgcaa
acagcgcttgatggctggtgcgaggatacggtcgcccgccttagcgcgtccggggcagac
agcgccattggccggattgaacgcatccgtgatgatcatgcgcgccttagtgaactggtg
gaacggatcaaagcctgccttgatccgattgatgatctgaccggcgataaaacgcatgcc
ccagttcatctgctgcgcagtcatgtcactgcggccgaggcactggcagccagcgacacc
caaaccggcgctgatcgcctgtggcgcggcgaagcgggtgaggcattggcggatttcgtt
catgaattgctgaatgcgctgacggattttgcgccgatgccgggtaatcggtatagcgcg
tttctcgatgccctgatggcggatcgtgccgtgcgtccgcgttatggcaaacatccgcgc
ctgtttatctggggcacggttgaagcccagatgcagaaggccgatctgaccattcttggc
gggcttaatgaaggcgtctggccgcccgaagccggggccgatccgtggatgagccgcccg
atgcggcgcaatttcggcttgccggcccccgaataccgggttgggcaatcggcccatgat
ttccagcaactgttttgttcacccgatgtggtgatgacccgtgcattacgtatcgaaggc
acgccaaccgtgccgtcacgctggttgttacgcattgaaaacattcttcgcaaatcgcgc
gtttcgatggagaaacccgacgccgccgagtggcgtgcactggctgatcttattgatgaa
ccggccttgagcatgcggatcaagatcggacgcccggcccccaaaccgcctgtatcggcg
aggccggatcgcctgtcggtgacccagatcgaaacgtggatgcgtgatccctatgcgatc
tatgcccgtcatatccttggcctgcgcaagctcgatggtatcgacgaagatcccggtgcc
gcggattacggcaacctgattcacgacgcccttgatcagttcatcgcccgccatcccgaa
aatttgccaccggatggcgaacatgaattgctgatcattggtcgcgaagtattcaaaccg
cttgccgcacgtcccggtctttgggccttctggtggccacggttcgagcgcatcgccaaa
tggttcatccagaccgaagcagcccggcgcgatgccgtgcgcaaatcctataccgaacaa
tccggaacccttgataccagcagcggttttcaggtctatgcccgtgctgaccgcattgat
cagctgcgcgatggcgggattgcgatcattgactataaaaccggcgcaccacccagtcag
ggcgacgttgccaacgggtttgcgccgcaattgccgcttgaagccgccatcgccgaaaag
ggcggttttggcgatgtgcccgccggttccccggccagcatggcgttctggaaactctcg
ggcggggatccggcaggtgagatcgttgaaatcaatacaggccggatgaaaaccaccccg
gccgaactggcacatgcggctgtggatggtgtgaacgggttggcggcggcctttgccgat
cccgatacgccctatctcagtgttccgcatcccgatcacgcgccgaagtattccgactat
gtccatctcgcccgcctgcgtgaatggatgggcagcgaagatatcgaagtgcttgatgat
gttgataatggtggggagggtgatgcgtcatga
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