Thalassospira tepidiphila: MACH01_37040
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Entry
MACH01_37040 CDS
T09750
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb03030
DNA replication
ttb03430
Mismatch repair
ttb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MACH01_37040 (holA)
03430 Mismatch repair
MACH01_37040 (holA)
03440 Homologous recombination
MACH01_37040 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttb03032
]
MACH01_37040 (holA)
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_37040 (holA)
Enzymes [BR:
ttb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MACH01_37040 (holA)
DNA replication proteins [BR:
ttb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MACH01_37040 (holA)
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MACH01_37040 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF6981
Motif
Other DBs
NCBI-ProteinID:
BDW90937
LinkDB
All DBs
Position
4112054..4113085
Genome browser
AA seq
343 aa
AA seq
DB search
MKLKAAQVENFLRAPDAKAQLVLIYGEDEGLVRERATKLAKTVVEDLKDPFRVIELGTGQ
LKEDPSRLRDEAAAMSFGGGRRVIRLRDIGEAQAPVIADFLGDPAGDALIVIEAGSLPTR
SKLRQAVEKAGNGMALPCYADGARDIESLIQSIMEEHKLRIDRDATSYLVANLGSDRMIS
RSELEKLALYALKDGQVTLADAMACVGDSSARHYDDVIQAVSQGNVVNLDAALTRLVEEG
LNPVGALRMMISYFQKLHLVKGQVSQGTSADQAMKSLRPPLFFKAADQFRANLNYWAVNN
LQRALQILLEAEKDCKSGLAIPETIAHRAMIKVAVARQKQVRR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaggcagcacaggttgaaaacttcttgcgcgccccggatgcgaaggcgcag
ctggtcctgatctatggcgaggacgaaggccttgtgcgtgaacgtgcgaccaaactggcc
aaaaccgtagtcgaggacctcaaggatcccttccgcgtgatcgagcttggcacgggccag
ctgaaagaagatcccagccgcctgcgcgacgaggccgccgccatgagctttggcggcggg
cgacgcgtgatccgactccgcgatattggtgaagcacaggcccccgtgatcgccgacttc
ctgggcgatccggccggcgatgccctgattgtcattgaagccggaagtcttccgactcgc
tccaaactgcgtcaggctgtcgaaaaggccggcaatggcatggccctgccctgctatgcc
gatggcgcacgcgacatcgaaagcctgatccagtcgatcatggaagaacacaaactgcgc
attgaccgcgatgcgacaagctatctggtcgccaatctcggctcggaccgcatgatttca
cgaagcgagcttgaaaaactcgccctttatgcgctcaaagacggccaggtcacgctggca
gacgccatggcctgcgttggcgacagttccgcccgccactatgacgatgtcattcaggcc
gtctcacagggcaatgtggttaatcttgatgccgccctgacccgcctggttgaagaaggc
ctcaacccggtcggcgccttgcggatgatgatcagctattttcaaaagcttcatctggtc
aaggggcaggtttcccagggtaccagcgccgatcaggcgatgaagtcgctccgcccgccg
ctgtttttcaaggccgccgatcagtttcgcgcaaatctgaattactgggcggtcaataac
ctgcagcgtgcgttgcaaatcctgctggaagccgaaaaggactgcaaaagcggcctggcc
atccccgaaaccatcgcccatcgtgccatgatcaaggtcgccgttgcccgccagaaacag
gtcagacgctaa
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