Thalassospira tepidiphila: MACH01_38440
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Entry
MACH01_38440 CDS
T09750
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttb03016
]
MACH01_38440 (truB)
Enzymes [BR:
ttb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MACH01_38440 (truB)
Transfer RNA biogenesis [BR:
ttb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MACH01_38440 (truB)
Prokaryotic type
MACH01_38440 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF2969
Motif
Other DBs
NCBI-ProteinID:
BDW91077
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All DBs
Position
4243933..4244859
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AA seq
308 aa
AA seq
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MARRRRGKSINGWLAVDKPLEITSSTVVNQVRRLLDANKAGHGGTLDPLASGVLPIAFGE
ATKTVAYVMDGSKSYRVTLKFGEARSTDDAEGEVIETSDHRPTEDEIKAVLGEFIGEIQQ
VPPKFSAIKVNGKRAYDLARRDEDVVLQPRPILIKDLRLVDMPDRDHAVFDVVSGKGAYM
RSLARDIALRLGTVGYIAALRRTSAGPFSEGNAIPLQELLDMDPDEVMKKLLPVETALDD
IPALALTEVEAQRLSSGQPVGLLPVAKRNALENPVVQDEIVCAMLHDRAVALAEITGGEI
RPVRVFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgccgtcgcggtaaaagcattaatggctggctggcggtggacaagcccctg
gagatcacgtcatcaaccgtggtcaatcaggtgcgccgtctgcttgatgccaacaaggcc
ggacatggcgggacacttgacccgctggcgtctggcgttctgccaattgcctttggcgaa
gcaaccaaaacggttgcttatgtcatggatggcagcaaaagttatcgcgtgacgctgaaa
ttcggcgaagcgcgcagtacggacgatgccgaaggcgaggttatcgaaacctccgaccat
cgtccgacggaagacgaaatcaaggctgtgctgggtgaattcatcggtgaaatccagcag
gtgccgccaaagttttcggcgatcaaggtcaatggcaagcgtgcctatgaccttgcgcgc
cgcgatgaagatgtggtgttgcagccacgtccgattctgatcaaggatcttcgactggtc
gacatgccagatcgcgatcacgccgtgtttgacgttgtgtcaggcaaaggtgcgtatatg
cgatctttggcgcgcgatatcgcgctgcgcctaggcaccgtcggctatatcgccgcgctt
cgccggacttcggcggggccgttttcggaagggaacgccattcccctgcaggaactgctg
gatatggacccggacgaggtgatgaagaaactgcttccggttgagaccgcgctggacgac
atcccggcgctggccctgaccgaagtcgaggcgcaacgcctttcctctggccagcctgtc
gggctgttgccggtggcaaagcgcaatgcccttgaaaaccccgtcgtgcaggacgaaatc
gtctgtgccatgctccatgaccgcgctgttgcgttggctgagatcactggtggcgaaatt
cgacctgtgcgtgtttttaatctctaa
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