Thalassospira tepidiphila: MACH01_39280
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Entry
MACH01_39280 CDS
T09750
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ttb
Thalassospira tepidiphila
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttb03032
]
MACH01_39280 (ihfB)
03036 Chromosome and associated proteins [BR:
ttb03036
]
MACH01_39280 (ihfB)
03400 DNA repair and recombination proteins [BR:
ttb03400
]
MACH01_39280 (ihfB)
DNA replication proteins [BR:
ttb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MACH01_39280 (ihfB)
Chromosome and associated proteins [BR:
ttb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MACH01_39280 (ihfB)
DNA repair and recombination proteins [BR:
ttb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MACH01_39280 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HD_assoc_2
HU-CCDC81_euk_2
TPPII
HU-CCDC81_bac_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BDW91161
LinkDB
All DBs
Position
4335585..4335860
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AA seq
91 aa
AA seq
DB search
MTKSELIARLAEMNPHLYQRDVERIVATIFDEITDALARGDRVELRGFGAFSVKQREARV
GRNPRTGDAVPVGEKKVPYFKTGKQLRERLN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgaattgattgcccgccttgcggagatgaacccgcatctctatcagcgc
gacgttgaacggattgtcgccacgatctttgacgagatcacagatgcgcttgcgcgcggc
gaccgggtcgagcttcgcggctttggcgcattttccgtaaaacagcgtgaggcccgcgtc
ggccgtaacccgcgtaccggggatgcggttcctgtcggtgagaaaaaggttccctatttc
aaaaccggcaaacagcttcgtgaacgtttgaactga
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