Thiohalobacter thiocyanaticus: FOKN1_0089
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Entry
FOKN1_0089 CDS
T05229
Name
(GenBank) DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ttc
Thiohalobacter thiocyanaticus
Pathway
ttc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOKN1_0089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_0089
Enzymes [BR:
ttc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOKN1_0089
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOKN1_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
zf-CHY
PriA-like_WH
AAA_19
Zn_ribbon_TOP3B
HypA
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
BAZ92494
UniProt:
A0A1Z4VMQ3
LinkDB
All DBs
Position
89027..91198
Genome browser
AA seq
723 aa
AA seq
DB search
MALPCPLYRVFDYRLAQPGRIAPGSRVRVPFGRRNLVGVVVELSPDTELPPAQIRPLSEL
LDAQPVVPPDLLALLRWAAGYYHHPIGEVLAQALPALLRQGRPARIEQTRHWQLSAAGRA
VDPADLARAPRQAALLSVLARCPEGADRDRLQREGLYRRDSLRALVDKGWVEERLETPGL
DTPGAGAAAPSLNPAQADAVQAVAEHAGFGCFLLDGVTGSGKTEVYIRAIEQALAAGRQT
LLLVPEIGLTPQLMQRLRARLAAPMVILHSGLSERERLNAWVAARDGAARIVVGTRSAVF
TPLPAPGLFIVDEEHDPSLKQQDGFRYSARDLLIWRARQQDVPVLLGSATPSLESLYNAD
QGRYQRLHLPNRAGAASAPELKLLDIRGQPLREGLAEPLLGAMRRHLARGEQVLLFLNRR
GFAPTLICHECGWVATCRRCDSHLTLHQRRGRLHCHHCDASQEVPVQCPECGSPDLRGLG
YGTERIEQTLQQLFPDHPCLRIDRDSTRRKGQLEALLEQAHSGAARILLGTQMLAKGHHF
PGVTLVGILEADQRLFSSDFRASERLAQLIVQVAGRAGRAERPGTVLIQTHHPDHPLLRR
LVTEGYAAFAAAALAERRDTGLPPYASLALLRAEATDREAPREFLEQAHALALQQSGPEI
EFWGPVPAPMEKRAGRYRAQLLVQSAARAALHRLLDAWIPVLAESPAARRIRWSVDVDPV
DTF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgccctgccccctgtaccgggtcttcgattaccgcctggcgcagcccggccgc
atcgcccccggcagccgggtgcgggtcccgttcggccgccgcaatctggtcggcgtggtg
gttgaactcagtcccgacacggagttgcccccggcgcagatccggcccctgtccgaattg
ctcgatgcccagccggtcgtcccgcccgacctgctggccctgctgcgctgggccgccggc
tattaccaccatccgatcggggaggtcctggcccaggccctgccggccctgctgcgtcag
ggacggcccgcccggatcgaacagacccgccactggcaactgagcgctgcgggccgggcg
gtggatcccgccgacctggcccgggcgccgcgccaggccgccctgctcagcgtcctggcc
cgctgcccggagggcgccgaccgcgaccggctgcagcgtgagggtctgtaccggcgcgac
agcctcagggccctggtcgacaagggttgggtggaggaacgcctggagacgccgggactg
gataccccgggtgcgggtgccgcagccccgtcactcaaccccgcccaggccgacgccgtc
caggccgtggcggagcacgccggcttcggctgcttcctgctcgacggagtgaccggcagc
ggcaaaaccgaagtctatatccgcgccatcgaacaggccctggcggccggccgccagacc
ctgctgctggtacccgagatcggcctgactccgcagctgatgcagcggctgcgggcgcgg
ctggcagcacccatggtgatcctgcattcggggctgagcgagcgcgagcgcctcaatgcc
tgggtggcggcgcgcgacggcgctgcgcggatcgtggtcggcacccgctcggccgtgttc
accccgctgccggcgccggggctgttcattgtggacgaggaacacgacccctcgctcaag
cagcaggacgggtttcgctactcggcccgcgacctgttgatctggcgcgcccggcagcag
gacgttcccgtcctgctgggttcggccacgccttcgctggaaagcctctacaacgccgat
cagggacgctatcagcgcctgcatctgccgaaccgcgccggcgccgccagcgcgcccgaa
ctcaagctgctggacatccgcggccagccgctgcgcgagggactggccgaaccgctgctg
ggcgccatgcgccggcacctggcgcgcggcgaacaggtgctgctgtttctcaaccggcgc
gggttcgccccgacactgatctgccatgagtgcggctgggtggcgacctgccggcgctgc
gacagccacctcaccctgcaccagcgccgcggccggctgcactgccatcactgcgacgcc
agccaggaggtgccggtgcagtgccccgagtgcggcagtccggatctgcgcggcctgggc
tacggcaccgagcgcatcgagcagaccctgcagcagctgttccccgaccatccctgtctg
cgcatcgaccgcgacagcacccggcgcaagggccaactcgaggccctgctggaacaggcc
cacagcggcgcggcgcgcatcctgctcggcacccagatgctggccaagggccatcatttt
cccggcgtgaccctggtcggcatcctggaggccgaccagcgcctgttctccagcgacttc
cgcgccagcgaacgcctggcccagctgatcgtccaggtcgccggccgcgccgggcgggcc
gaacggccgggcacggtgctgatccagacccaccacccggaccacccgctgctgcggcgg
ctggtcaccgagggctacgccgccttcgccgcggcggccctggccgaacgccgggacacc
ggcctgccgccctatgccagcctggccctgctgcgggccgaggccaccgaccgcgaagcg
ccgcgggaatttctggaacaggcccatgccctggcgctgcagcagtcgggcccggagatc
gagttctggggtccggtgccggcgccgatggaaaaacgcgccggccgctaccgggcccag
ctgctggtgcagtccgcggcgcgggccgccctgcaccggctgctcgatgcctggatcccg
gtcctggccgagtcgcccgcggcccggcgcatccgctggtcggtggacgtggacccggtg
gataccttttag
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