Thiohalobacter thiocyanaticus: FOKN1_0359
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Entry
FOKN1_0359 CDS
T05229
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttc03032
]
FOKN1_0359
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_0359
Enzymes [BR:
ttc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FOKN1_0359
DNA replication proteins [BR:
ttc03032
]
Prokaryotic type
DNA Topoisomerases
FOKN1_0359
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOKN1_0359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAZ92763
UniProt:
A0A1Z4VMN1
LinkDB
All DBs
Position
371915..374212
Genome browser
AA seq
765 aa
AA seq
DB search
MGKHLVIVESPAKAKTIKKYLGKDYEVMASYGHVRDLVPKGGAVDPEHDFAMKYDIIDRN
SKHVDAIAKAMNKADDLILATDPDREGEAISWHLYELLKNKKAVKDKPVHRVVFHEITKR
AIQEAIEHPRGLSMDLVNAQQARRALDYLVGFNLSPLLWKKVRRGLSAGRVQSPALRLIV
EREEEIEKFRPREYWTVEADLEKDDQAFVAKLNVLHGKKLGQFTLNNEDKARKVEQELIE
AAGGELTVGKVEKKQRKRNPAAPFITSTLQQEASRKLGFTASRTMRVAQQLYEGIDIGEG
AVGLITYMRTDSVTLANEALDEIRELISQRYGADNLPDAPRTFKTKAKNAQEAHEAIRPT
SAMRVPEEIKSHLSQEQFRLYDLIWKRTVACQMIHATIDTVGVDFPCGEGNVLRATGSTI
AIPGFISVYQESQDDAKAESDENMLPRLEEGDVVSLVKLRPEQHFTEPPPRYTEASLVKT
LEEHGIGRPSTYASIISTLQQREYVTLEKKRFQPTDVGRVVSRFLTQHFDQYVDYDFTAK
LEDDLDEIARGEREWVPLLHQFWDPFQQRIKTKEEGVSRKEVTTEELDEECPKCGQPLQI
KLGRRGRFIGCSGYPECDYTRNVGEDKEDAEPEYIEGRSCPECGSQLLIRTGRYGKFIGC
SSYPDCKYIEPLEKPEDTGVTCPECKQGSMLKRKARSGKIFYSCSRYPDCKYAVWNEPID
EPCPDCGWPMLTLKTTKRRGTEKVCPQKECKFSEPVETEESADGE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagcatctggtgatcgtggaatcgcccgccaaggcgaagacgatcaagaaatat
ctcggtaaggactacgaagtcatggcctcctacggtcatgtgcgcgatctcgtgcccaag
ggcggtgcggtcgatcccgagcacgacttcgccatgaagtacgacatcatcgatcgcaat
tccaagcacgtcgacgccatcgccaaggccatgaacaaggccgacgatctgatcctggcc
actgacccggaccgcgagggcgaggccatctcctggcatctgtacgaactgctcaagaac
aagaaggcggtcaaggacaagccggtgcaccgggtcgtgtttcacgagatcaccaagcgc
gccatccaggaggccatcgagcatccccgcggcctgtccatggacctggtcaatgcccag
caggcgcgccgggcgctggattacctggtgggcttcaacctctcgccgctgctgtggaag
aaggtgcgccggggactgtcggcgggccgggtgcagagtccggccctgcggctgatcgtc
gagcgcgaggaggagatcgagaagttcaggccgcgcgaatactggacggtggaggccgac
ctggaaaaggacgaccaggccttcgtcgccaaactcaatgtgctgcacggcaagaagctc
ggccagttcacgctgaacaatgaggacaaggcccgcaaggtcgagcaggagttgatcgag
gccgccggcggcgaactgaccgtcggcaaggtcgagaagaagcagcgcaaacgcaatccg
gccgcgcccttcatcacctccaccctgcagcaggaggcctcgcgcaagctgggcttcacc
gccagccgtaccatgcgcgtggcccagcagctgtatgaaggcatcgacatcggcgagggc
gcagtcggtctcatcacctacatgcgtaccgactccgtgacgctggccaacgaagccctc
gacgagatccgcgaactgatcagtcagcgctacggtgcggacaacctgcccgatgcgccg
cgtaccttcaagaccaaagccaagaacgcccaggaggcgcacgaggccatccgtccgacc
tcggccatgcgggtgccggaggagatcaagtcgcatctcagccaggagcagttcaggctc
tacgacctgatctggaagcgcaccgttgcctgtcagatgattcatgccactatcgacacc
gtcggcgtggacttcccctgcggcgagggcaacgtgctgcgcgccaccggctcgaccatc
gccatccccggcttcatcagcgtctaccaggagagtcaggacgacgccaaggccgagtcc
gacgagaacatgctgccgcggctggaggagggcgacgtggtcagtctggtcaagctgcgc
cccgagcagcacttcaccgaaccgccgccacgctacaccgaggccagtctggtcaagacg
ctggaggaacacggcatcggccggccctcgacctatgcctccatcatctccaccctgcag
cagcgcgagtacgtcaccctggagaagaagcgtttccagcccaccgacgtgggccgtgtg
gtgagccggttcctcacccagcatttcgaccagtacgtggactacgatttcaccgccaag
ctcgaggacgaccttgacgagatcgcccgcggcgagcgcgagtgggtcccgctgctgcac
cagttctgggatcccttccagcagcgcatcaagaccaaggaagagggggtctcgcgcaag
gaggtcaccaccgaggagttggacgaggaatgccccaagtgcggccagccgctgcagatc
aagctgggccggcgcggacgcttcatcggttgcagcggttacccggagtgcgactacacc
cgcaatgtcggcgaggacaaggaagacgccgagcccgaatatatcgagggccgcagctgt
cccgagtgcggctcgcagctgctgatccgtaccggccgttacggcaagttcatcggctgc
tcgagctaccccgactgcaagtacatcgagccgttggaaaagcccgaggacaccggcgtg
acctgcccggagtgcaagcagggcagcatgctcaagcgcaaggcgcgttccggcaagatc
ttctactcctgctcacgctaccccgactgcaagtacgccgtgtggaacgagcccatcgac
gagccctgtcccgactgcggctggcccatgctcacgctcaagaccaccaagcgccgcggc
accgagaaggtctgcccgcagaaggaatgcaagttcagcgaaccggtggagacggaggag
tcagcggacggggagtag
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