KEGG   Thiohalobacter thiocyanaticus: FOKN1_0365
Entry
FOKN1_0365        CDS       T05229                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ttc  Thiohalobacter thiocyanaticus
Pathway
ttc03030  DNA replication
ttc03410  Base excision repair
ttc03420  Nucleotide excision repair
ttc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ttc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOKN1_0365
   03410 Base excision repair
    FOKN1_0365
   03420 Nucleotide excision repair
    FOKN1_0365
   03440 Homologous recombination
    FOKN1_0365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ttc03032]
    FOKN1_0365
   03400 DNA repair and recombination proteins [BR:ttc03400]
    FOKN1_0365
Enzymes [BR:ttc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FOKN1_0365
DNA replication proteins [BR:ttc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FOKN1_0365
DNA repair and recombination proteins [BR:ttc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FOKN1_0365
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FOKN1_0365
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2 FCD
Other DBs
NCBI-ProteinID: BAZ92769
UniProt: A0A1Z4VMC9
LinkDB
Position
378850..381558
AA seq 902 aa
MPSTKPVVLVDGSSYLYRAFHALPPLTNSRGEPTGAVYGVVNMLKRLLKDYQPEHVAVVF
DARGKTFRDEMFEHYKANRPPMPEELAAQIEPLHALVRALGFPVLQVPGVEADDVIGTLA
RQADARGEPVLISTGDKDMAQLVEGGITLVNTMSNTTLDRAGVVEKFGVPPERIVDYLAL
VGDSSDNIPGVPKVGPKTAAKWLNEYGSLDALIEQAESVKGKVGESLRENLAQLDLSRQL
ATIRCDLELEQDVDALAMQPPDRAALKALYEQMEFRTWLKEILGSDESAQASETAAPPAA
EVDYETVLTQTQLDAWLKELEQADHFAFDTETTSLEYMQAEIVGLSFAVETHRAAYVPLA
HDYAGAPEQLDRDRVLKQFRKLLEDKAPKKIGHNLKYDMSVLANHGIELRGIAFDTMLES
YVLDSTASRHDMDSLALKYLAHKCTSYEEVAGKGAKQLSFNEVPVEAAAPYAAEDADITL
RLHQTLWPRLQQEKTLEGVFNDIDLPLVPVLSRMERNGVKVDRDMLATQSGELAQKMAEI
EEAAFQEAGQPFNIGSPKQIQEILFDQQGLPVLAKTPKGAPSTAESVLAELALDYRLPRL
ILDYRSLSKLKSTYTDKLPERIDARTGRVHTSYHQAVAATGRLSSTEPNLQNIPVRTESG
RRIRQAFIAEQGYRILAADYSQIELRIMAHLSGDEGLLAAFAAGEDIHRATAAEVFGAQP
DQVTSEQRRSAKAINFGLIYGMSAFGLAKQLGIERGAAQEYVDLYFARYPGVKAYMDRTR
EQAHDQGYVETLFGRRLYLPEINARNHQRRTAAERTAINAPMQGTAADIIKLAMISTDAW
IRSGGLDLRMVMQVHDELVFEVAAGDVEAAQAAIRERMQTAAELAIPLEVEVGVGANWDE
AH
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgcccagtaccaagccggtcgtcctggtggacggctcctcctatctctaccgggccttc
cacgccctgccgccgctgaccaattcccgcggcgagcccaccggggcggtctatggtgtg
gtcaacatgctcaagcgcctgctcaaggactatcagcccgagcacgtggcggtggtgttc
gatgccagaggcaaaaccttccgcgatgagatgttcgagcactacaaggccaaccgcccg
cccatgccggaggaactggccgcccagatcgagccgctgcacgccctcgtccgggcgctg
ggctttccggtgctgcaggtcccgggcgtggaggcggacgatgttatcggcaccctggcc
cggcaggccgacgcccgcggcgagccggtgctgatctccaccggcgacaaggacatggcc
caactcgtcgaaggcggcatcaccctggtcaacaccatgagcaacaccaccctggaccgc
gccggcgtggttgagaagttcggcgtgccgccggagcgcatcgtcgactacctggccctg
gtcggcgacagttcggacaacatccccggggtgccgaaggtcggccccaagaccgcggcc
aagtggttgaacgagtacggctcgttggatgcgctgatcgagcaggccgaatcggtcaag
ggcaaggtcggcgagagcctgcgtgagaacctggcgcagctggatctgtcgcgccagctc
gccaccatccgctgcgacctggagctggagcaggacgtcgacgccctggccatgcagccg
ccggaccgcgcggcgctcaaggcactctacgagcagatggagttccgcacctggctgaag
gagatcctgggcagcgacgagtccgcacaggcgtcggagacggccgcgccgcccgccgcc
gaggtcgactacgagaccgtgctgacgcagacgcagctcgacgcctggctgaaggaactg
gagcaggccgatcatttcgccttcgataccgagaccaccagcctggaatacatgcaggcc
gaaatcgtcggcctgtccttcgccgtggagacgcaccgggccgcctatgtgcccctggcc
cacgactatgccggcgcgccggaacagctcgaccgcgaccgggtgctcaagcagttcagg
aaactgttggaggacaaggcaccgaagaagatcggtcacaacctcaagtacgacatgagc
gtgctggccaatcacggcatcgagctcaggggcatcgccttcgacaccatgctggaatcc
tatgtgctggacagcaccgccagccgccacgatatggattccctggcgctgaaatacctg
gcgcacaaatgcaccagctacgaggaggtcgccggcaagggggcgaagcagctcagcttc
aacgaggtccccgtcgaggccgccgcgccctatgctgccgaggatgccgacatcaccctg
cgtctgcaccagaccctgtggccgcggctgcaacaggagaagacgctggagggcgtattc
aatgacatcgatctgccgctggtgccggtgctgtcgcggatggaacgcaatggtgtgaag
gtcgaccgcgacatgctggcgacccagagcggggaactggcgcagaagatggccgaaatc
gaggaggccgcgttccaggaagccggtcagccgttcaacatcggctcgcccaagcagatc
caggaaatcctgttcgatcagcagggcctgccggtcctggccaagacgcccaagggcgcg
ccctccaccgcggaaagcgtactggccgaactggcgctggactatcgtctgccgcggctg
atcctggactaccgcagcctgagcaagctcaagtccacctacaccgacaagctgcccgaa
cgcatcgatgcccgcaccgggcgggtgcatacctcgtatcaccaggcggtggccgccact
ggccggctgtcctccaccgagcccaatctgcagaacatcccggtgcgcactgagtccggc
cggcgcatccgccaggccttcattgccgagcagggctatcgcatcctggccgcggactac
tcccagatcgagctgcgcatcatggcgcatctgtccggcgacgaggggctgctcgcggcc
ttcgccgccggcgaggacatccaccgcgccaccgcggccgaggtgttcggcgcgcagccg
gaccaggtcacgagcgagcagcggcgcagcgccaaggcgatcaacttcggcctgatctac
ggcatgtcggccttcggcctggcgaaacagctgggcatcgagcgtggcgcggcgcaggaa
tacgtggatctgtacttcgcccgctatccgggtgtgaaggcgtacatggaccgcacccgc
gagcaggcccatgaccagggttatgtggagaccctgttcggccggcgcctgtacctgccc
gagatcaacgcccgcaaccaccagcgtcgcaccgcggccgaacgcaccgccatcaacgcc
cccatgcaggggacggccgccgacatcatcaagctggccatgatcagcaccgacgcctgg
atccgcagcggcgggctggacctgcgcatggtgatgcaggtccacgacgagctggtgttc
gaggtggcggcaggcgatgtcgaggcggcgcaggcggccatccgcgagcgcatgcagacc
gcggccgagctggccattccgctggaggtcgaggtaggggtcggtgccaactgggacgag
gcccactga

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