Thiohalobacter thiocyanaticus: FOKN1_0997
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Entry
FOKN1_0997 CDS
T05229
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttc03019
]
FOKN1_0997
03009 Ribosome biogenesis [BR:
ttc03009
]
FOKN1_0997
Messenger RNA biogenesis [BR:
ttc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOKN1_0997
Ribosome biogenesis [BR:
ttc03009
]
Prokaryotic type
rRNA processing factors
FOKN1_0997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF7351
CHP02642
Motif
Other DBs
NCBI-ProteinID:
BAZ93397
UniProt:
A0A1Z4VP48
LinkDB
All DBs
Position
1046209..1047660
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AA seq
483 aa
AA seq
DB search
MSEEILINVTPQETRVAMVENGVLQEVFIERERSLGLVGNIYKGVVCRVLPGMQAAFLDI
GLERAAFLHASDIATRDAESEGASTISQLLRDGQELMVQVIKDPLGTKGARLTTHITIPS
RYLVFMPYATNVGVSQKIEDETERQRLKQVVLDDAGDEGLGYIVRTAAEGVPDAALRSDM
AFLRRLWGAIQERGRQAGAGEMVHEDLPLSKRALRDLVGVEVEKVRVDSRETHASLVRFG
EQFVPEVVERLEYYPGERPIFDLYSVEDEIQRALDRKVQLKSGGYLIIDQTEAMTTIDVN
TGAYVGHRNLEETIFKTNLEAAQAIARQLRLRNLGGIIIIDFIDMSDEDHKRQVLRALER
HLERDHARSHISEVSSLGLVQMTRKRTRESLEHVLCGVCPTCNGRGSLKTPETVVYEIFR
EILREARQYDAEQLLVLAAHEVVDLLLDEESTSLAELESFIGKPIKFQVESLYTQEQYDV
VLM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatactgatcaacgtcacgccgcaggagacccgcgtggccatggtcgag
aacggcgtgctgcaggaagtcttcatcgagcgcgaacgcagcctgggcctggtgggcaac
atctacaagggcgtggtgtgccgggtgctgcccgggatgcaggccgcgtttctggacatc
ggcctggaacgggccgctttcctgcatgcctccgacatcgcgacccgcgatgccgagtcc
gaaggggcgagcaccatcagccagctgctgcgcgacggccaggagctcatggtgcaggtg
atcaaggacccgctcggcaccaagggcgcacgcctgaccacccatatcaccatcccctcg
cgctatctggtgttcatgccctatgccaccaacgtcggggtgtcgcagaagatcgaggat
gagaccgagcgccagcgcctgaagcaggtggtgctcgatgatgccggtgatgaggggctg
ggctatatcgtgcgcacggccgccgagggtgtgcccgatgcggcgctgcgttcggacatg
gccttcctgcgccggctgtggggtgcgatccaggaacgcggccgccaggccggtgccggc
gagatggtccacgaggacctgcccctgagcaagcgcgccctgcgcgacctggtcggggtg
gaggtggagaaggtgcgggtggactcgcgcgagacccatgccagcctggtgcgtttcggg
gagcagttcgtccccgaggtggtcgaacggctggaatactatccgggcgagcggcccatc
ttcgatctctacagcgttgaggacgagatccagcgcgcgctggatcgcaaggtgcagctg
aagtcgggcggctatctcatcatcgaccagactgaggccatgaccaccatcgacgtcaac
accggcgcctatgtgggccatcgcaacctggaagagaccatcttcaagaccaacctggag
gcggcccaggccatcgcccgccagctgcgcctgcgcaacctgggcgggatcatcatcatc
gacttcatcgacatgtccgacgaggaccacaaacgccaggtgctgcgcgcgctggagcgc
cacctggaacgcgaccacgcccgcagccacatcagcgaggtctccagcctcggcctggtg
cagatgacgcgcaagcgcacccgtgagagcctggagcatgtgctgtgcggcgtctgcccc
acctgcaacggtcggggttcgctgaagacgcccgagaccgtggtctacgagatcttccgc
gagatcctgcgcgaggcgcgccagtacgatgccgaacagctgctggtgctggccgcgcac
gaggtggtggatctgctgctggacgaggagtccaccagcctggcggaactggaatccttc
atcggcaaaccgatcaagttccaggtcgaatccctctatacccaggaacaatatgacgtc
gtgctcatgtag
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