Thiohalobacter thiocyanaticus: FOKN1_1071
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Entry
FOKN1_1071 CDS
T05229
Name
(GenBank) DNA repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ttc
Thiohalobacter thiocyanaticus
Pathway
ttc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOKN1_1071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_1071
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FOKN1_1071
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FOKN1_1071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
HEAT_2
HEAT
Motif
Other DBs
NCBI-ProteinID:
BAZ93471
UniProt:
A0A1Z4VPE7
LinkDB
All DBs
Position
1113472..1114008
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AA seq
178 aa
AA seq
DB search
MFLGGRGELFSLRRMEVAGRSPELRGQALFAAYYLNELLLRLLQRQDPHPEVFDAYVQAL
GSFALQPLEAVLRVFEKRLLEALGYALVLESDVSGEPIEARCRYRYLPEQGLERMQGQGG
ISGRALLALAAEACDNAQDLREIKPLLRQVLGQYLGERPLKTREFLIDLEGQGRSGHD
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctgggggggcgcggagagttgttcagcctgcgccggatggaggtggccgggcgc
tcgcccgagcttcgtggccaggccctgttcgcggcctattatctcaatgagctcctgctg
cgactgctgcagcgtcaggatccgcatcccgaggtcttcgatgcctacgttcaggcgctc
ggcagcttcgcgctccagcccctggaggcggtactgcgggtgttcgagaagcgactgctg
gaggccctggggtatgcgctggtactggagtcggacgtgtccggtgagccgatcgaggcc
cgctgccgctaccgctaccttcccgagcaggggctggaacggatgcaggggcagggcggg
atcagcggccgggccctgctggcactggcggccgaggcctgtgacaatgcgcaggatctg
cgtgaaatcaagccgctgctgcgccaggtgctgggacagtatctgggcgagcggccgctg
aagacacgcgaatttctcatcgatctggaaggacaggggcggagcggacatgattga
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