Thiohalobacter thiocyanaticus: FOKN1_1587
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Entry
FOKN1_1587 CDS
T05229
Name
(GenBank) DNA-binding transcriptional regulator subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttc03032
]
FOKN1_1587
03036 Chromosome and associated proteins [BR:
ttc03036
]
FOKN1_1587
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_1587
DNA replication proteins [BR:
ttc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FOKN1_1587
Chromosome and associated proteins [BR:
ttc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FOKN1_1587
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FOKN1_1587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
BAZ93977
UniProt:
A0A1Z4VQS0
LinkDB
All DBs
Position
1665721..1665993
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELIDAVADAANLSKADATRAVDAVLDSVTGALKKGEQVSLVGFGTFEVRERAARQG
RNPQTGATIQIAASKAPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctgaactgattgacgccgttgccgatgccgcgaacctgtccaaggccgat
gccacccgcgcggttgatgccgtgctggattccgtgacaggtgccctgaagaagggggag
caggtcagcctggtcggcttcggtaccttcgaggttcgcgagcgcgccgcccgccagggc
cgcaatccgcagaccggcgcgaccatccagattgccgcctccaaggcgcccgcattcaag
gctggaaaagcgctgaaggatgccgtaaactaa
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