Thiohalobacter thiocyanaticus: FOKN1_1752
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Entry
FOKN1_1752 CDS
T05229
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttc03016
]
FOKN1_1752
Enzymes [BR:
ttc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FOKN1_1752
Transfer RNA biogenesis [BR:
ttc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FOKN1_1752
Prokaryotic type
FOKN1_1752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAZ94138
UniProt:
A0A1Z4VS22
LinkDB
All DBs
Position
1851372..1852289
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AA seq
305 aa
AA seq
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MARHRPKGRNVNGILLLDKPTGITSNEALQSVKRLFKARKAGHTGSLDPLASGLLPICLG
EATKASGFLLDADKHYQVRCKLGEKTATGDAEGEVTETRPVEGIDAARLESVLAGFRGEI
VQIPPMYSAVKHQGQRLYKLARQGVEVEREPRHVTIHKLILESMDLPFFDLDVHCTKGTY
VRTLAEDIGEALGCGAHVAALRRLGVGPYDSEKMVTLEKLKELSEDGFEDLDALLLPIES
ALAQWPDVRLNDDAAYYVRQGQPVQVPHAPTSGWVRMYQNGDRFLGMGQILDDGRVAPRR
LMGAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcatcgtcccaagggcagaaacgtcaacggcatcctgttgctggacaagccc
accggtatcacatccaacgaggcgttgcagagcgtcaaacgactgttcaaggcccgcaag
gccgggcataccggcagcctggatccgcttgccagcggcctgctgcccatctgcctgggc
gaggcgaccaaggcctcaggctttctgctggacgccgacaagcactatcaggtgcgctgc
aagctgggcgagaagaccgccaccggcgatgccgagggcgaggtgaccgagacccggccg
gtcgagggcatcgacgctgcccgccttgagtcagtgctggccggcttccgcggcgagatc
gtccagattccgcccatgtactcggccgtcaagcaccaggggcagcggctgtacaagctg
gcccgtcagggggtggaggtcgaacgtgaaccccggcatgtgaccattcacaagctgatc
ctcgaatcgatggatctgcctttcttcgacctcgatgtccactgcaccaagggcacctat
gtgcgcaccctggccgaggatatcggtgaggcgctcggctgcggcgcccacgtcgccgcc
ctgaggcgcctgggcgtggggccgtatgacagcgaaaaaatggtgactttggaaaagctt
aaggaactgtctgaagatggtttcgaggatctggacgcgctcctgctaccgatcgagagc
gccctggcccagtggccggatgtccggctcaatgacgatgccgcctactatgtgcgtcag
ggccagccggtgcaggtgccgcatgcccccaccagcggatgggtgcgcatgtaccagaat
ggcgaccgcttcctcggcatgggccagatcctggatgacggccgggtcgccccccgccgc
ttgatgggtgcccgctga
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