Thiohalobacter thiocyanaticus: FOKN1_2030
Help
Entry
FOKN1_2030 CDS
T05229
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ttc01002
]
FOKN1_2030
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ttc01011
]
FOKN1_2030
Peptidases and inhibitors [BR:
ttc01002
]
Cysteine peptidases
Family C82
FOKN1_2030
Peptidoglycan biosynthesis and degradation proteins [BR:
ttc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FOKN1_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Multi_ubiq
Motif
Other DBs
NCBI-ProteinID:
BAZ94410
UniProt:
A0A1Z4VS01
LinkDB
All DBs
Position
complement(2126908..2128572)
Genome browser
AA seq
554 aa
AA seq
DB search
MSEPFFLNILRRLFAYALLLTAWPAAAAGPDSVDLRNGIEHFVTRAETQMTCRGLDWEAL
QRFYSQRGYLPVWWDIFERRPVPAAKQLIAILEQSPEHGLSVSDYHLHELMALLPSRPEA
DLVQIDVLLTDAFLAYARHLYSGRNRPQLIDPAWHIEPDSLDAEALLARVLDNTRLEATL
AALAPPHPEYRQLQDLLVRYRGLAASGGWPALEPGPLLRPGARDLRVATLRQRLWLEGFP
VDWEGDEYLFDSHLEQTLKRFQQLRGIEPDGIVGPDTLQALNVTATERIQQILLNLERWR
WLPHDLGTRHIMVNIAGFRLQLVEHDQVTQDMRVIIGKPYRSTPAFVGRMSYLVFNPYWN
VPERNMREDLLPQQIADPGYLAANGYRILEGWSPEAREIDPAEIDWQRVRPAQFPYRLRQ
DPGPQNSLGRIKFMLPNRFDVYLHDTPARHLFERTVRTFSSGCIRVEEPVALAERVLAGT
EEDWSADAIREVIASRETRSIRLPEPLPVYVLYWTVWVDDEGRAHFVNDVYGRDRRMAQW
LGTQAESESEAAVQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaaccgtttttcctcaatattctccgacgtctgtttgcatacgccctgttgctg
acggcatggccggcggccgcggccggtcccgacagcgtcgatctgcgcaatggaatcgaa
cacttcgtcacccgtgccgagacgcagatgacctgccgtggcctggactgggaggcgctg
cagcggttctattcccagcgcggctaccttccggtctggtgggatatattcgaacgccga
ccggtcccggccgcgaagcaactgatcgcgatcctcgagcagagtcccgaacatggcctg
tcggtcagcgattatcacctgcatgaactgatggcgctgctgccgagcaggccggaggct
gacctggtccagatcgatgtcctgttgaccgatgcttttctggcctatgcccgacatctg
tacagcggccgcaaccgcccgcagctgatcgatccggcatggcacatcgagccggacagc
ctggatgccgaggcgttgctggcccgggtgctggacaacacccgcctggaagcgacgctc
gccgccctggcgccgccgcaccccgaataccgacaactccaggacctgctggtgcgctat
cgcggcctggccgcaagcggcggttggccggccctggaacccgggccgctgctgcggccg
ggcgcgcgcgacctgcgcgtggccacgctgcgccagcggttgtggctggagggatttccg
gtggactgggaaggcgacgaatacctgttcgattcccacctggaacagacgctgaaaagg
ttccagcagctgcgtggcatcgagcccgacggcatcgtcggcccggatacgctgcaggcg
ctgaatgtgacagccaccgagcgtattcagcagatcctgctcaatctggagcgttggcgc
tggctgccgcacgatctgggtacgcgtcacatcatggtcaacatcgccggtttccgactg
cagctggtcgagcacgatcaggtcacgcaggacatgcgtgtgatcatcggcaagccctac
cgctcgacgccggcctttgtcggccgcatgagctatctggtgttcaatccctactggaat
gtgcccgagcgcaacatgcgcgaagacctgcttccgcagcagattgccgatcccggctat
ctcgccgccaacggctaccggatcctggagggctggagtccggaggccagggagatcgat
cccgccgaaatcgactggcagcgggtgcggccggcccagtttccctatcgcctgcgccag
gacccggggccgcagaacagtctgggccggatcaagttcatgctgcccaaccgtttcgat
gtctacctgcacgatacaccggcacggcacctgttcgagcgtaccgtgcgcaccttcagt
tcgggctgcatccgggtggaggaaccggtcgcactggccgagcgggtactcgccgggacg
gaggaggactggagcgcagacgcgatccgcgaagtgatcgcaagcagggagacccgcagc
atccggctgcccgaaccgctgcccgtgtacgtgctgtattggacggtgtgggtcgatgac
gaaggtcgggctcatttcgtcaatgacgtttatggccgggaccgccgcatggcgcagtgg
ttggggacgcaggcggaatccgaatccgaagcggccgtccaataa
DBGET
integrated database retrieval system
