Thiohalobacter thiocyanaticus: FOKN1_2043
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Entry
FOKN1_2043 CDS
T05229
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttc03016
]
FOKN1_2043
Enzymes [BR:
ttc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FOKN1_2043
Transfer RNA biogenesis [BR:
ttc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FOKN1_2043
Prokaryotic type
FOKN1_2043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAZ94423
UniProt:
A0A1Z4VSF2
LinkDB
All DBs
Position
complement(2141199..2142209)
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AA seq
336 aa
AA seq
DB search
MEYHPAFGPPLGRGRLRVEPEDFVVIEQPLVEPADQGEHAWLRVRKRGQNTDWVAGQLAR
LAGVKSRDVSYAGLKDRHAVTEQWFSVQLPGRADPDWSVLDAEGVTVLEARRHSRKLRRG
ALRGNRFRLRLRDFTGDVDALLERTEVIASRGLPNYFGAQRFGREGGNLAAARRMFADPR
RRLPRQKRSLYLSAARSYLFNRILAERVRRGDWDRCLSGDVMQLDGRSALFAVPACDDEI
QSRLAAQEIHPTGALWGRGESLAGDECARLEAACLEPEAALCEGLERAGMELDRRALRVR
VEGLRVTPEGGDLWLEFGLPAGSYATVLLEQLVEWD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaataccatcctgccttcggcccgccgctcggccgcggccggctgcgcgtcgagccc
gaggatttcgtcgtcatcgagcagcccctggtggaacctgcggatcagggcgagcatgcc
tggttgcgggtgcgcaaacgcggccagaacaccgactgggtggccgggcagctggcgcgc
ctggccggggtgaaatcacgtgacgtcagctacgccggattgaaggaccgccacgccgtg
accgagcagtggttttcggtgcagctgccggggcgcgcggatcccgactggtccgtactg
gacgccgagggcgtgaccgtgctcgaggcgcggcggcattcgcgcaagctgcgccggggc
gcgctgcgcggcaatcgtttccgcctgcggctgcgcgactttaccggcgatgtcgatgcc
ctgctggaacggacagaggtgatcgcttcccgcggcctgcccaactatttcggcgcgcag
cgtttcggccgggagggcggcaatctggcggcggcccggcgcatgttcgccgatccgcgc
cgacgcctgccgcgccagaaacgcagcctgtatctgtccgcggcccgcagttatctgttc
aaccggattctggccgagcgggtgcgccgcggtgactgggatcgctgcctgtccggcgat
gtgatgcaactggacgggcgcagcgccctgttcgccgtcccggcgtgcgatgatgagatt
caatcccgcctggccgcgcaggagatccatcccaccggggcgttgtgggggcggggcgag
tcgctggccggcgatgaatgcgcgcggctggaagcggcctgcctggaaccggaagccgcg
ctgtgcgaggggctggagcgggcagggatggaactggaccgccgggccctgcgggtacgg
gtggaagggttgcgggtgacgccggagggtggcgatctgtggctggagttcggcctgcct
gccggcagctatgccactgtgctgctggagcagctggtggagtgggactag
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