Thiohalobacter thiocyanaticus: FOKN1_2259
Help
Entry
FOKN1_2259 CDS
T05229
Name
(GenBank) DNA polymerase III subunit epsilon-like 3'-5'exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ttc
Thiohalobacter thiocyanaticus
Pathway
ttc03030
DNA replication
ttc03430
Mismatch repair
ttc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOKN1_2259
03430 Mismatch repair
FOKN1_2259
03440 Homologous recombination
FOKN1_2259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttc03032
]
FOKN1_2259
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_2259
Enzymes [BR:
ttc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOKN1_2259
DNA replication proteins [BR:
ttc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOKN1_2259
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOKN1_2259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAZ94633
UniProt:
A0A1Z4VT12
LinkDB
All DBs
Position
2375403..2376125
Genome browser
AA seq
240 aa
AA seq
DB search
MSDDARGQGEAPSWPEYFARQTQACRTPALKRFYAAGLPAADTPIANASLLALDFETTGL
DPHRHAIVSIGMVPFNLRSIRPAAGRYWVIKPQRPLREESIAFHRITHSEVEHAPPFEAV
LDDILASLAGHLVVVHYRNIERPFLDAAVMAALGEHCLFPLIDTMALEARHERIDRWRRL
KRFLGVQPTSIRLADSRERYGLPAYSSHHAKVDAMATAELFQAQIARHYSPDTPVSELWL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacgcccggggtcagggcgaagcaccgagttggcccgagtatttcgcccgc
cagacacaggcctgcagaacccctgcgctcaaacgcttttacgctgccggactaccggct
gcagataccccgatcgccaacgcctccctgctggcactggatttcgagaccaccggactg
gatccccatcggcacgccatcgtcagcatcggcatggtgccgttcaatctgcgcagcatc
cgcccggccgcagggcgctactgggtcatcaagccgcagcggccgttgcgggaggaatcc
atcgccttccatcgcattacgcactcggaagtcgagcacgccccgcccttcgaggccgtg
ctcgacgacattctggccagccttgccggacatctggtggtcgtgcattaccgcaacatc
gaacgcccgttcctggatgccgcagtgatggccgcactcggcgaacactgcctgttcccg
ctcatcgataccatggcgctcgaggcccggcacgaacgcatcgaccgctggcggcgcctc
aaacgcttcctcggcgttcagcccacctccatccgcctggccgacagccgcgaacgctat
ggtctgccggcctactcctcccatcatgccaaggtggatgcgatggccacggccgaactg
ttccaggcccagatcgcgcgccactactcgccggacacgccggtctccgaactctggctg
tag
DBGET
integrated database retrieval system
