Thiohalobacter thiocyanaticus: FOKN1_2347
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Entry
FOKN1_2347 CDS
T05229
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ttc
Thiohalobacter thiocyanaticus
Pathway
ttc03030
DNA replication
ttc03430
Mismatch repair
ttc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOKN1_2347
03430 Mismatch repair
FOKN1_2347
03440 Homologous recombination
FOKN1_2347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttc03032
]
FOKN1_2347
03400 DNA repair and recombination proteins [BR:
ttc03400
]
FOKN1_2347
Enzymes [BR:
ttc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOKN1_2347
DNA replication proteins [BR:
ttc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOKN1_2347
DNA repair and recombination proteins [BR:
ttc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOKN1_2347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF1719
Motif
Other DBs
NCBI-ProteinID:
BAZ94721
UniProt:
A0A1Z4VSV8
LinkDB
All DBs
Position
complement(2475281..2476009)
Genome browser
AA seq
242 aa
AA seq
DB search
MRQIVLDTETTGLEPSQGHRIIEIGCVELVNRRHTRRSFHQYLQPDREIDEGAIEVHGIT
NEFLTDKPRFADVAEDFLKFISGAELVIHNAPFDVGFINHELSLLGGGQGRLEDHCTVLD
TLELARRLHPGQKNNLDALCRRYEVDNSNRELHGALLDAEILADVYLHMTGGQTSLTLEG
REAEQAGQGGAQAIRRLAADRPPLPVLRASTTECEAHRRYLETLAAAGSCAWLELESLPG
DS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagatcgtactggacaccgaaaccaccggcctggagcccagccaggggcaccgg
atcatcgagatcggctgtgtggaactggtcaaccggcgccacacccgccgcagcttccac
cagtacctgcagccggaccgcgagatcgacgagggcgcgatcgaggtccatggcatcacc
aacgagttcctcaccgacaaaccgcgctttgccgacgtggcagaggatttcctgaagttc
atcagcggggcggaactggtgatccacaacgcccccttcgacgtcggcttcatcaaccac
gaactgtcgctgttgggcggaggacagggccggctggaggatcactgcacggtactggat
accctggaactggcgcggcggctgcatccagggcagaagaacaacctggatgccctgtgc
cggcgctacgaggtggacaactccaaccgcgaactgcacggagcgctgctcgacgccgag
atcctggccgacgtctatctgcacatgaccggcggccagaccagcctcaccctggaaggc
cgggaggcggagcaggccgggcagggcggggctcaggccattcgccggctggcggcggac
cgcccgccgctgccggtactgcgggccagcacgaccgagtgcgaggcccacaggcgttat
ctggagacgctggccgccgccggcagctgcgcctggctggaactggaatccctcccgggc
gacagctga
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integrated database retrieval system
