Thiohalobacter thiocyanaticus: FOKN1_2350
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Entry
FOKN1_2350 CDS
T05229
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ttc
Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:
ttc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ttc01011
]
FOKN1_2350
Enzymes [BR:
ttc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FOKN1_2350
Peptidoglycan biosynthesis and degradation proteins [BR:
ttc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FOKN1_2350
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BAZ94724
UniProt:
A0A1Z4VU41
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Position
2477494..2479104
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AA seq
536 aa
AA seq
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MIPKYNLVLCTLLALALAACQTPWVRDAQPRAGDAAPAVAEHPTATPEPETKTTPPTPAA
PEARIEPAPPPDLWTRLRAGFTLPTRLDDRRVQLHLQWFKRHPHYLSRVVERAEPYLPWI
LDRIEQAGVPTEIALLPIVESGFNPFAYSHGRAAGLWQFIPATGRRFGLEQNWWYDGRRD
WVAATDAALAYLQANHARFDGDWLLSLAAYNAGEGNVLKAQRRNRARNRATDFWSLDLPR
ETEKYVPKLLALREVFTHPADYGLELPPLDPDQRLELVETGGQLDLALAAELAGLPLETL
YRLNPGFNRWATPPDGPHRLVLPHGASARFSQALAELPEAQRVQWQRHRVAAGDTLIGLA
SQYHTTVALLQEVNQLRDHRIRQGDHLLIPTARESLERYSLSAGQRKLALQNRKRAGNRQ
VHVVRAGDSFWDLARRYKVGVRELAGWNSMAPTDTLRVGQKLVVWTQTPAAANPNIALQR
VRYRVRQGDSLARISQRFKVSIRDLEQWNDLDRRRYLQPGQVLTLYVDVTRQAGNG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaaatacaacctagtactgtgcaccctcctcgccctggccctggctgcctgc
cagaccccgtgggtgcgtgacgcgcagccccgcgccggggacgcggccccggccgtcgct
gaacacccgaccgccacccccgaacccgagacgaagacgacaccgccgaccccggccgca
cccgaggcccgcatcgaaccggccccgccgccggatctctggacccggctgcgtgccggt
ttcaccctgcccacccgtctcgacgaccgccgggtccagctgcatctgcagtggttcaag
cgtcacccgcattacctcagccgggtggtagagcgggccgaaccctacctgccctggatc
ctggaccgcatcgaacaggccggggtccccaccgagatcgccctgctgcccatcgtggaa
agcgggttcaatccctttgcctactcccacggccgcgccgccggcctgtggcagtttatc
ccggccaccggccggcgcttcgggctggaacagaactggtggtatgacggccgccgggac
tgggtcgccgccaccgacgccgcgctggcctacctgcaggccaaccacgcacgcttcgac
ggcgactggctgctgtccctggccgcctacaatgccggtgagggtaacgtactcaaggcc
cagcgacgcaaccgggcgcgcaaccgggccaccgatttctggtccctggatctgccgcgg
gagacggaaaagtacgtgcccaagctgctggcgctgcgcgaggtcttcacccatcccgcg
gactacggcctggaactgccgccgctggacccggaccagcgcctggaactggtcgagacc
ggcggccagctggacctggcgctggccgccgaactggccgggctgccgctggagaccctc
taccggctcaatcccggtttcaaccgctgggccaccccgcccgacgggccgcaccggctg
gtgctgccgcacggcgcatctgccagattcagccaggcgctggccgaactgcccgaggct
cagcgggtacagtggcaacgccaccgggtcgcggccggcgacaccctgatcggtctggcc
agtcagtatcacaccaccgtggcgctgctgcaggaggtcaaccagctgcgtgatcaccgc
atccgccagggggatcacctgctcattcccactgcccgggagtcgctggagcgctacagc
ctgtcggccggccagcgcaaactggcgctgcagaaccgcaagcgtgccggcaacaggcag
gtgcatgtggtgcgcgcgggcgacagcttctgggatctggcgcggcgctacaaggtgggg
gtgagggaactggccggctggaacagcatggccccgaccgataccctgcgggtagggcag
aaactggtggtctggacccagacgccggcagccgccaatcccaatatcgccctgcagcgg
gtgcgctaccgggtccgccagggggattcgctggcgcgcatctcgcagcgcttcaaggtc
agcatccgcgacctggagcagtggaacgatctggaccgccgccgctacctgcagccgggc
caggtactgaccctctacgtcgacgtcacccgccaggccggcaacggttga
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