Thermococcus thioreducens: A3L14_08275
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Entry
A3L14_08275 CDS
T05104
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ttd
Thermococcus thioreducens
Pathway
ttd03022
Basal transcription factors
ttd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L14_08275
09124 Replication and repair
03420 Nucleotide excision repair
A3L14_08275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttd03021
]
A3L14_08275
03036 Chromosome and associated proteins [BR:
ttd03036
]
A3L14_08275
03400 DNA repair and recombination proteins [BR:
ttd03400
]
A3L14_08275
Enzymes [BR:
ttd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A3L14_08275
Transcription machinery [BR:
ttd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A3L14_08275
Chromosome and associated proteins [BR:
ttd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
A3L14_08275
DNA repair and recombination proteins [BR:
ttd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A3L14_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_30
SNF2-rel_dom
AAA_19
AAA_11
HerA_C
Motif
Other DBs
NCBI-ProteinID:
ASJ12881
UniProt:
A0A0Q2M2T5
LinkDB
All DBs
Position
1515409..1517328
Genome browser
AA seq
639 aa
AA seq
DB search
MSETGTPEYFPYEELRPHQREFIELVSEAVKNGENAIIEAPTGFGKTVSVLAGILPYAKE
MGYKVLYLARTHRQMDRVIEELKAINKKNPVSGVELRSRKDLCLHTYLTQFTSDAYTAMV
VCKNLKKLGKCEFYENEKKKKTEFDELVKFFLSEPSHPAEILSYAETLELCPYDLTKRIA
ERADVIVASYLYLLSPTIRENFISSLDVDYSDLIVVFDEAHNLPDQAISALSDRISIHTV
NRAIKEADEYNEHEIANFLSIFGRGLEMLYDEKLKDRDVHETPIQPELVFAHVVDILSLD
TRGLVRILNDMVAVGDAIREDRIEKGKPPRSYIGRIGEFLLFWISLIGREDYLFLMSRDK
GLSLELVALDPSKALGFIRNVQSAVFMSGTLTPMEAFRDVMGIENARMKKFPRMVKRENA
QVLVAKDVSTRGDERSLQVYRRMVDYIVEAARLIPKNVGVFTASYEVLQGLLSANLQVRL
EETGKAIFIEKQGASSAENDAMIASFKAHARGKGAVLLGVMGGRNSEGQDYSGDEMNGVI
LVGIPYARPTPRVQAQIRYFEGKFPGKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSIIV
LDYRLLWSSIKKDLPDWMKESLRPVDLPRMRLYLRRFWG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaccggaacgccagaatactttccctacgaagaacttagaccgcatcagcgg
gagttcatagagctcgtctcagaggccgttaaaaacggagaaaacgctataatcgaagcc
cctaccggctttggaaagactgtgagcgttttagccggaatcctgccttacgccaaggag
atgggctacaaggttctctatctagccagaacccacaggcagatggacagagtcattgag
gagctgaaggcgataaacaagaagaaccccgtctctggagtcgagctgaggagcaggaag
gacctctgccttcacacatacctcacccagttcacgagcgacgcctacaccgccatggtc
gtctgcaagaacctcaagaagctcggcaaatgtgagttctacgagaacgagaagaagaaa
aagacggagttcgacgagctggtgaagttcttcctgagcgagccgagtcacccggccgag
attctgagctacgcggaaaccttagagctgtgcccctacgatctgaccaagaggatagcg
gagagggcagacgtcatagtggccagctacctctacctcctcagcccaaccattcgggag
aacttcataagctccctcgacgttgactactcagacctgatagtggtttttgatgaggcc
cacaacctgcctgaccaagccatctcagccttgagcgaccggataagcatacatacggta
aacagggcgataaaagaggccgacgagtacaacgagcacgagatagccaacttcctcagc
attttcggccgcggattggagatgctctacgacgagaagctcaaggacagggacgtgcat
gaaacccccatccagccggagctggtcttcgcgcacgtcgttgatatcctgagcctcgac
acccgtggcctcgtcaggattctcaacgacatggtcgccgttggcgacgccataagggag
gacaggatagagaagggcaagccgccgcgctcttacatcggcaggataggcgagttcctc
ctcttctggatctcgctcattggacgggaggactacctattcctcatgagcagggacaaa
gggctgagccttgagctggttgctttagatccatcgaaagccctgggcttcatcagaaac
gtccagagtgcggttttcatgtccggaaccctcaccccgatggaggcgttccgcgacgtc
atgggaatcgaaaacgcccgaatgaagaagttcccgaggatggtaaagagagagaacgca
caggttttagtggctaaagacgtatcgacgaggggtgatgagcgctcgctccaggtttac
aggcgcatggtggactacatcgtcgaggcggccagactcataccgaagaacgtcggagtc
ttcactgcttcctacgaggttctccagggccttctctcagcgaaccttcaagtcaggctt
gaggaaacgggaaaggcgatattcattgagaagcagggcgccagctcagcagagaacgat
gcgatgatagcgagcttcaaggcccacgccagggggaagggagcggtgctcctcggagtc
atgggtggaagaaacagcgaggggcaggactacagcggcgatgagatgaacggtgtgatc
ctcgttggaataccctatgcgaggccgacgccgagggttcaggcccagataaggtacttc
gaggggaaattccccggaaagggccgatactacggctattacctgccggcccacaggaag
ctggttcaagctgccggaagggttcaccgctcagccgaggaaaaggggtcaatcatagtc
ctcgactaccgcctcctctggagctcgataaagaaggacctgccggactggatgaaggaa
tctttaaggccggttgatttaccaaggatgaggctgtatttgaggaggttctggggttag
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