Thermococcus thioreducens: A3L14_08305
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Entry
A3L14_08305 CDS
T05104
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ttd
Thermococcus thioreducens
Pathway
ttd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L14_08305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttd03019
]
A3L14_08305
03009 Ribosome biogenesis [BR:
ttd03009
]
A3L14_08305
Enzymes [BR:
ttd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3L14_08305
Messenger RNA biogenesis [BR:
ttd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3L14_08305
Ribosome biogenesis [BR:
ttd03009
]
Prokaryotic type
rRNA helicases
A3L14_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DUF2278
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASJ12885
UniProt:
A0A1I0M8Z4
LinkDB
All DBs
Position
complement(1521314..1522549)
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AA seq
411 aa
AA seq
DB search
MSFERLGLSEATLVAVREKGFETPTDIQREVIPRLLSGDVDIIGQSQTGTGKTAAFALPI
IEAIDPKIRAVQAIILTPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQIRALERG
THVIVGTPGRVLDHIRRGTLDLSSVKFFILDEADRMLDMGFIDDIEAIFRETPRRKRVLM
FSATMPPEIRRLARRYMKNHEVISVSSDELVPEMVDQEYVEVVPAWKFTVLKKILGNDFY
GIVFCATKRETRELSERLRRAGYSAEALNGDMSQNARERTFWRFKTKRTRILVATDVAAR
GLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKRGRAITFIMPGEFKRLRYIAQVVGVE
IRKSELSEEIPREYRERYESDRSGYYGRSGRRNSRYPRNSRGYSKSSRGRW
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaagattgggattatccgaggccacgttagtggcggttagagagaagggt
tttgaaacaccaactgacattcagagggaggtcattcctcgcctcctatcgggtgacgtc
gatataatcggccagtcccagaccgggacaggaaagaccgcggcatttgcgctccctata
attgaggccatcgatccgaaaataagggccgttcaggcgataattctcacgcccacgagg
gaactagcccttcaggtggcggacgagatcaagagcctccgtgggaggaagagggtttac
gtatatgccgtctacggcggccagccaatagggccacagataagggcccttgagagggga
acccacgtcatcgttggaactcccggtagggttctcgaccacataaggcgcggaactctc
gatttaagctcggtgaagttcttcatccttgacgaggccgacaggatgctcgacatgggc
ttcatagacgatatagaggcgattttcagggagacgccacggaggaagagggtgctgatg
ttctctgccaccatgcccccagagattagaaggctcgcgaggcgttacatgaagaaccat
gaggtgataagcgtcagcagcgacgagttggttccggaaatggtggatcaggagtacgtg
gaggtcgtcccagcgtggaagttcacggtgctgaagaagatactcggcaacgacttctac
ggcatagtcttctgcgccaccaagagggaaaccagggagctgagtgagaggctcaggaga
gccggctacagcgccgaggctctaaacggcgacatgagccaaaacgcgagggaaaggaca
ttctggcgcttcaagacgaagagaacaaggattttagttgcgaccgacgttgcggcgagg
ggcctcgacgttcaggacataagccacatcgtcaactactccctgcctatgactgccgag
gactacgtccaccggatagggagaaccggcaggatgggcaagcggggaagggcgataacc
ttcataatgcccggtgagttcaagaggctgcgctacattgcacaggtagtcggcgtggag
ataaggaagtccgagctcagcgaggagatcccgagggagtaccgcgagaggtatgaaagt
gatcgctccggttactacgggagaagcggaagaagaaactcccgctatccaaggaactcc
cggggctattctaagagctcccgaggtagatggtga
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