Thermococcus thioreducens: A3L14_09185
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Entry
A3L14_09185 CDS
T05104
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ttd
Thermococcus thioreducens
Pathway
ttd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ttd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L14_09185 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttd03021
]
A3L14_09185 (tfb)
Transcription machinery [BR:
ttd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L14_09185 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L14_09185 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
RUBY_RBDX
FYDLN_acid
Cyclin_N
Zn_ribbon_tTFIIB
A2L_zn_ribbon
Trm112p
HTH_Tnp_ISL3
FtrD-like
Cyclin_C
HTH_AsnC-type
Zn_Ribbon_Prim
Zn_ribbon_LysW
DZR
YceG
Zn_ribbon_IS1595
Auto_anti-p27
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
ASJ13047
UniProt:
A0A0Q2S653
LinkDB
All DBs
Position
complement(1664320..1665231)
Genome browser
AA seq
303 aa
AA seq
DB search
MADKNICPICGSDKLFYDPRRGEIVCSVCGYVVQQNVIDEGPEWRAFDPDQRAKRARTGA
PMTLMIHDKGLSTDIDWRDRDIHGNQITGMYRTKMRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMMLPRRVKEVAASLYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDE
IAAVSKVTKKEIGRSYRFLARGLGLNLRPTSPIEYVDRFGDALGVSQRTKKRAKEILQEA
IKRGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLGIN
VPI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataagaatatctgtccgatatgtggctccgataagctgttttatgacccgcgg
aggggcgaaattgtctgttctgtctgcggttacgtcgttcagcagaacgtcatcgatgag
ggtcccgagtggcgcgccttcgatccggatcagagggcaaagcgcgccagaaccggcgca
cccatgacactgatgatccacgataagggcctctccactgacatagactggcgcgatagg
gacatacacggcaaccagataaccggaatgtacaggacgaagatgcgccgcttgaggatg
tggcagcgcaggatgaggataaacgacgccgccgagcgtaacctggcctttgccctcagc
gagctggacagaatggccgcccagatgatgcttccgaggcgcgtcaaggaagttgccgca
tcgctctaccgtaaggcggttatgaagaagctcatccgtggaaggtccatagagggcatg
gtttccgccgctctgtatgccgcctgcaggatggagggcatcccgagaactctcgacgag
attgcagcggtttcaaaggtcacgaagaaagagataggcaggagctaccgcttcctcgcg
agggggctcggtcttaacctcaggccgaccagcccgatagagtacgttgacaggtttgga
gacgcactcggcgtcagccagaggacgaagaagcgcgccaaggagatacttcaggaggcc
atcaaaaggggtatcacgagcggaaagggtccaacaggattggcggccgctgcactgtat
gtcgcctcgcttttggagggtgagaagaagacccagcgcgaggtggcagaggtagcgcac
gtaaccgaggtcacggtgaggaacaggtataaggaactcgtcgagaagctcggcataaac
gttccaatatga
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