Caldanaerobacter subterraneus subsp. tengcongensis: TTE0004
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Entry
TTE0004 CDS
T00081
Symbol
RecF
Name
(GenBank) Recombinational DNA repair ATPase
KO
K03629
DNA replication and repair protein RecF
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TTE0004 (RecF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE0004 (RecF)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TTE0004 (RecF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_13
AAA_27
DUF2813
AAA_29
Lyx_isomer
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AAM23321
UniProt:
Q8RDL3
Structure
PDB
PDBj
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Position
3277..4371
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AA seq
364 aa
AA seq
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MYLKEIFVDNFRNLKKQKLEFCEGVNLIYGLNAQGKSNLLEAIRLLSMGRSFRGSKMSEL
VKFDEEYFYVRGLVRSADFYEKKIEFGYKVNGNKVIKVNGNKLKSTGEILGHFLTVIFSP
EDIEIIKEGPSRRRKYLDACISVIDKNYFFDLLQYNKTLSNRNSLLKKIKEEGKGEDLLE
IFDEKLAEYGARIIKVRNNYLEKLKNSMSKFLMEISNEKLEIIYLNSAGVKEVHEENLIR
EKLKNRLTKSLTLDLKYLSTQVGPHREDFKILINGYDSRVYSSQGQKRTAALCLKLSELE
ILEEETGEKPVLLLDDVMSELDDNRKKYILKKLEGFQSFITHTSKSDVEGDCCFKIYDGI
VMRE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
ttgtacttaaaggaaatttttgtagacaattttagaaatttaaaaaagcaaaaattagaa
ttctgtgaaggagtcaatttgatatatgggctaaatgcacaagggaagagcaatctttta
gaggcaataaggcttctcagcatgggaaggtccttcagaggaagtaaaatgtctgagctt
gtgaaatttgatgaagagtatttttacgtgagaggtctagtcagaagtgcggatttttat
gaaaagaaaatagaatttgggtataaggtaaatggaaataaggttattaaagtaaatggc
aataagttaaagagcacaggagagattttggggcactttttgacagttatattttcccct
gaggacatagagataataaaagaagggccttcccgcagaagaaaatatttagatgcttgc
atttccgtcattgacaaaaattatttttttgaccttcttcagtacaataaaaccctatct
aacaggaatagcttgcttaaaaagataaaagaagaaggaaaaggagaagatttattggaa
atatttgatgaaaagctggcagagtatggagctagaataataaaggtgagaaataattac
cttgagaaattaaaaaatagcatgtcaaaatttttaatggaaatttctaatgaaaagttg
gaaatcatatatttaaacagcgcaggagtaaaggaagtgcacgaagaaaatctcataaga
gaaaagttaaaaaataggctgactaaaagtttgaccctagatttaaaatatctgtctaca
caagtgggtcctcatagggaagattttaagatattgataaatggatatgattctagggtg
tattcgtcacaagggcagaaaaggacagctgccctgtgcctcaagctttcagaactagag
attttagaagaagagactggagaaaagcctgttttgcttttggatgacgtgatgtcggag
ttggacgataacagaaagaaatacattttaaaaaagcttgaaggctttcagtcttttatc
acccacacttcaaagtcagatgtagagggagactgttgttttaaaatttatgatggaatt
gtcatgagagaatag
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