Caldanaerobacter subterraneus subsp. tengcongensis: TTE0011
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Entry
TTE0011 CDS
T00081
Symbol
GyrA
Name
(GenBank) DNA gyrase (topoisomerase II) A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tte03032
]
TTE0011 (GyrA)
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE0011 (GyrA)
Enzymes [BR:
tte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TTE0011 (GyrA)
DNA replication proteins [BR:
tte03032
]
Prokaryotic type
DNA Topoisomerases
TTE0011 (GyrA)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TTE0011 (GyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Noelin-1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
AAM23328
UniProt:
Q8RDK6
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All DBs
Position
11704..14127
Genome browser
AA seq
807 aa
AA seq
DB search
MNEEMDKVIPVDIEDEMRNSYIDYAMSVIVGRALPDVRDGLKPVHRRILYAMNEMGLTPD
KPYKKSVAVVGEVLGKYHPHGDAAVYDTLVRLAQDFSMREVLIDGHGNFGSIDGDPPAAM
RYTEARLSRIALEMLTDINKETVDFVPNFDETLKEPVVLPSRFPNLLVNGSQGIAVGMAT
NIPPHNLAEVIDGIVAYIDNPYITVDELMKYIKGPDFPTGGIILGRDGIKETYETGRGKI
IVRAKAEIEEHKGKTRIVITEIPYMVLKAKLIEKIAELVHNKQIEGIADLRDESDRNGMK
IVIELKRDVNPKVILNKLYMHTQMQQTFGAIMLALVDGEPKILNLKQIIEKYVDHQADVV
TRRTKFDLKKAEERAHILEGLKIALDYIDEVINIIRSSKTEAIAKENLMKRFGLSDKQAQ
AIVDMRLGRLTGLERQKVEDELKELIEKIKELKEILADERKVLEIIKKELLEIKNKYASP
RKTVIVAKEEELDFEDLVQLEDVVVTMTHYGYIKRMPLDTYKSQKRGGKGILGISTREDD
FVEDIFITTTHDRLLFFTNKGKVYSLRTIDIPESGRQAKGTAIVNLIQISQGEKVTAVIP
LKKSDDIKYVLMCTKKGIIKKTSIEEFKSIKRNGIIAITLDENDELINVKLTNGEREVII
GTAKGYAIRFNEKDVRPMGRVARGVMAISLREDDEVVEMDLVHPDGEVLTVTEKGFGKRT
DLEEYRIQGRAGKGIIAMKLSKKTGKLVSIRCVQPEDEFMIISANGILIRMKVKDISKMH
RDTQGVTLMKLEDGDRVVSTARIESEE
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatggacaaggtcattcctgttgatatagaagatgagatgagaaattcc
tatattgattatgcgatgagcgtgattgtaggaagagcccttcctgacgtgagggatggt
ttaaaacctgttcatagaagaattctttatgccatgaatgagatgggtttgacaccagac
aagccctataaaaagagcgtagcagtagttggtgaagttttggggaaataccatcctcac
ggagatgctgctgtatatgatacgcttgtcaggcttgcacaggacttttccatgagagag
gttttgatagacgggcatggaaattttggcagcatagatggagaccctcctgccgcaatg
aggtatacagaagctaggctttcccgtatcgctcttgaaatgcttacagatataaacaag
gagactgtagatttcgttccaaactttgatgaaactttgaaagagcccgtggttttgcct
tctcgctttccaaacttactggtaaacggatctcaaggaattgcagtaggaatggctaca
aatatacctcctcacaatttagcagaagttatagatggcattgttgcctatatagacaac
ccttacatcacagtggatgaactgatgaagtacattaaaggaccagatttcccaacagga
ggtataatcctaggtagggacggaataaaggagacgtatgagacaggtagaggcaaaatt
atcgtcagagcaaaggcggaaattgaagagcacaaaggcaaaacgagaattgtaatcaca
gaaattccttacatggttttaaaggctaaattgattgaaaaaattgctgaattggtgcac
aacaagcaaatagagggaattgctgacttaagagatgaatctgacaggaatggaatgaaa
attgtaatagagctaaaaagggatgtcaacccaaaagttatacttaacaaattgtacatg
catactcagatgcagcagacctttggagctataatgttagctctggtagatggagagcca
aaaatactcaatctcaagcagattattgaaaagtacgtagaccatcaggctgatgtagtg
acaagaagaactaaatttgacttgaaaaaagcggaagaaagagcgcatattttggaaggt
ttaaaaatagctctcgactacatagatgaagtgataaacataataagaagttctaaaaca
gaagctattgctaaagaaaatttgatgaagaggtttggactaagcgataaacaagcacaa
gcaatagttgacatgagattaggaaggctgacagggcttgagaggcaaaaagtagaagat
gagttaaaagaactcatagagaagataaaagagttgaaagagattttagcagatgaaagg
aaagtgttggagataataaagaaagagcttttagaaataaaaaataaatacgcatctcca
agaaagacagttattgtagcaaaggaagaggaattagattttgaagatttggttcagctg
gaagatgtagtagttactatgacccactacgggtatataaagaggatgcctcttgacacc
tataagtctcaaaagagaggcggtaaaggaattttaggaatatctaccagagaagatgat
tttgtggaagatatattcataaccactacccacgataggctgttgtttttcacgaataaa
gggaaagtatatagtttgaggactatagatattcctgaaagtgggagacaagccaaagga
actgctatagtaaacttgatacagatttctcaaggtgaaaaggtcacggcagttattcct
cttaagaagtcagacgacataaagtatgtccttatgtgtaccaaaaagggcataataaag
aaaacttccattgaagaatttaaatctattaagagaaatggaataattgccataactctg
gatgaaaatgatgagctcataaatgtaaagttgacaaatggagaaagagaggtaataata
ggtactgccaaaggatatgcgataaggttcaacgaaaaagatgtaaggccaatgggaagg
gttgcaagaggagtgatggctatatcgctaagagaagacgatgaagtcgtggaaatggat
ttggtacatcctgacggagaagttttgactgttacagaaaagggatttggcaagagaact
gatttagaagaatatagaatccaaggaagagcaggtaagggaataattgcaatgaaactt
agcaaaaaaacaggaaaactcgtctccataaggtgtgtccaaccggaagatgagtttatg
ataatctctgctaacggaattttgataagaatgaaagtaaaagatatatcaaaaatgcac
agagacactcaaggagtcacccttatgaaattagaagacggagatagagtggtctctacg
gcaagaattgaaagtgaggaataa
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