Caldanaerobacter subterraneus subsp. tengcongensis: TTE0265
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Entry
TTE0265 CDS
T00081
Symbol
SbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE0265 (SbcD)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TTE0265 (SbcD)
Archaeal homologous recombinant proteins
TTE0265 (SbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DUF1574
Motif
Other DBs
NCBI-ProteinID:
AAM23561
UniProt:
Q8RCY9
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Position
274773..275975
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AA seq
400 aa
AA seq
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MRILHTSDWHLGKTLENFSRLAEQEKFLDDFVKIAEENDVDLVIIAGDVYDSSNPPAKAE
MLFYNTLKRLANGERVILAIAGNHDNPERLSAASPLAYEQGVILLGSTKTIVPTGDFGRF
KIHNSGEGFFEVEIKGERAVVIALPYPSEKRLNEIFSESLEEEERQKSYSERVGRLFEEL
SKNYREDTINIAVSHIFVAGGEEAGSERPIQLGGSFTVELRHLPEKAQYIALGHLHKPQR
VSDVLPVYYSGSPLQYSKSEMNQSKCAYLVDLKAGEKAYVKEIYFKNYKPIEVFRCDGID
EALKICEEYKDKDVWAYFEIKTESPLPSSQIREMKRLMPDIVEIRPILPEEEDVFEEIEV
EDKDIRELFQEFYLKEKKVPPSEEMVELFMSIIGKEDEGA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttacacacttcagattggcatttagggaaaactctcgaaaatttttcaagg
cttgccgaacaagaaaaatttttagatgattttgtaaaaatagctgaagagaatgacgtg
gatttggtgataatagctggagatgtctatgactcttcaaaccctcctgcaaaggcagaa
atgctgttttacaatactttaaaaagactcgccaatggagaaagagttattttggcaatt
gcaggcaatcacgataacccggaaaggctttctgccgcaagccctcttgcctatgaacag
ggagtaatacttttggggtctactaaaactattgtgccaacaggagactttggcaggttt
aagattcacaattcaggggaaggcttttttgaggtagagataaaaggggaaagggctgtt
gtgatagcccttccctaccccagcgagaaaaggcttaatgagattttttctgaaagcctg
gaggaggaagagaggcagaagagctattctgaaagagtcggcaggctttttgaagagctt
tcaaaaaattacagggaagatactataaacatagctgtttcgcacatttttgtggcaggg
ggagaggaagcaggctcagaaaggcctattcagcttggaggaagttttactgtggagtta
aggcatcttcccgaaaaggctcagtacattgctttggggcaccttcacaagcctcaaagg
gtttctgatgtactgcctgtgtactattcaggttctcctcttcagtacagcaagagcgag
atgaatcaatcaaaatgcgcatatctggtggatttaaaagcgggagagaaagcttacgta
aaagaaatttactttaaaaattataagcccattgaggttttcaggtgcgatgggatagat
gaagctctaaaaatttgtgaagagtataaggacaaggatgtgtgggcttattttgaaata
aaaacagaatctcctcttccttcctctcagataagggaaatgaaaaggcttatgcctgat
atagtagagataaggccaatccttccggaagaagaggatgtctttgaagaaatcgaggta
gaggataaagacataagagagctgtttcaggagttttacctaaaagagaagaaagttcct
ccttcagaagagatggtggaactttttatgagcataattgggaaagaggatgagggagca
tga
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