Caldanaerobacter subterraneus subsp. tengcongensis: TTE0266
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Entry
TTE0266 CDS
T00081
Symbol
SbcC
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE0266 (SbcC)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TTE0266 (SbcC)
Archaeal homologous recombinant proteins
TTE0266 (SbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
DUF3450
ABC_ATPase
ABC_tran
AAA_21
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AAM23562
UniProt:
Q8RCY8
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All DBs
Position
275972..279505
Genome browser
AA seq
1177 aa
AA seq
DB search
MKPIRLKISGVNSFTEEQVINFELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS
KDFINTDSLSTSVVYEFEIGVGTERRRYIVERNIKKDLKNGGYKTTLARLREITAEGEKV
LAEKEREVHQKIVEIIGLTAEDFTRSVVLPQGKFSEFLKLSGRERRDMLERIFGLERYGN
DLMEKVRKVKNEKALLLGMVNGELSRYEGVTEEALKEALAKLELLKEEEKNLSAEREELL
KEREKLKEIWERQKELNQFLEKKRLLDEKASEIEVKRGKIEKARKALSVKPYIDSVEETE
KKLLLNKKELEKHAKELEEVSAQLEKIEKDYEITFREKEEKIPLLIEKEERLKRAVQIED
EIKRLSEEREKLLTEYKNLESNIKRLEEEKEKLFLSIENLKKNIAEKEEKIVSIRISTEE
KENVFKAFELEKEFERVKREREEKAYKIEEIEKLVEKQKGEYERIKVELTEKEEELQKEE
SSFNLLEVQKPLSSEELFNFQKELESKRLKLIEAQRNKELEEKLEKTLKEVLEEREKLVG
ELEKTEREYVEKGKALDALQKEIEEIVRKNMAGELAEGLEEGMPCPVCGSFHHINLAKKV
DEKLIEEKKKLERGLRTEREVLQEKLIMLKSQLSGFTAKEEISRAELEKAKENLRGIDLE
ILRKEIEEMEVKFKEEKEKLEDWAKEKEEKEKVLKRLKEEKGQLALEEARIKERLQKDLK
LLEEYKLSFEGIEREYQSLLKELENWKEKLGYANFSEKVEEINQKEKLIEKLREEVESLK
KNLEELNIKREKVLEDLNQLIVRKTQVVEVGKEKRSVLEKMQKELYSYSEGKDVKKYLED
VQKERAEILQRESFLKNRLEEERRKKQEIESKKVSTLENQILLTNMLKEQIEKLELSLSK
EGFKTKEEALSFVISSEEMSEIEIEVKRFENEYTSLVANIERLEGFLKGRQIEEEHWNRL
EERIRELEEILTGKRKEIGATEKAIHDMKENLKKVEELTKKKKELEHVIDMLEELDKLFQ
GNKFVDFIASKQLKYITFSASKRLKEISRGRYALEIDSENNFVMRDDFNGGVRRSVDTLS
GGETFLTSLSLALALSSHIQLKGKAPLEFFFLDEGFGSLDSELLDVVMTSLERLKKDKMV
VGIISHVEELKDRVPVKLIVTPPTVSGEGSKVRIEYT
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctattagacttaaaatttctggcgttaacagctttacagaagagcaagtcata
aattttgaacttctcactgaaaaagggctttttggaatatttggcccgacgggaagcggg
aaatccaccataatagatgctatcaccctttcgatgtacggaaaaattcccagaaacagc
aaagactttataaacactgactccctttccacttctgtggtatatgaatttgaaatagga
gtagggactgaaagaaggaggtacatagtagagagaaacataaaaaaagatttaaaaaat
ggcggatacaagactactttggcaaggctaagagagataaccgcagaaggagaaaaagtg
ctggcagagaaagaaagagaggttcatcagaaaatagtagaaataataggacttactgca
gaggactttaccagatctgtagtacttcctcaggggaaatttagcgaatttttgaaatta
agtggacgagaaaggcgggatatgctggagaggatttttggcttagaaagatatggaaat
gatttaatggaaaaagtgaggaaagtcaaaaatgaaaaagctctccttctggggatggta
aatggggagctttctcgctatgagggtgttacagaagaggctttaaaagaagcgctagcc
aagttagaacttcttaaagaagaagaaaaaaatttgagcgcagaaagagaagagctttta
aaagagagagaaaaattgaaagagatatgggaaaggcaaaaggagttaaaccagttttta
gagaaaaagagattgttagatgaaaaagcctctgaaatagaggtaaaaagagggaaaatt
gagaaggcaagaaaagccctttctgtaaagccatatatagattctgtagaggagacagaa
aaaaagcttttattgaacaagaaagaactagaaaaacacgctaaagagttggaggaagtg
agtgcgcaacttgaaaagatagagaaagattacgaaataacttttagggaaaaagaagag
aaaattcctcttcttattgagaaagaagaaaggctcaaaagggctgttcagattgaagat
gagataaaaaggctatctgaagaaagagaaaagcttttgacagagtataaaaacttagaa
agcaatattaaaaggttagaagaagaaaaggaaaaattatttctttctatagaaaacttg
aagaagaatatcgcagaaaaggaagagaagattgtaagcataaggattagtacagaagag
aaggagaatgtatttaaagcgtttgagcttgagaaagagtttgaaagggtcaaaagagaa
agagaggaaaaggcttacaagatcgaagagatagaaaaacttgtagaaaagcagaaggga
gagtacgagaggataaaggtggaacttactgaaaaagaggaagagttacaaaaagaggaa
agtagtttcaaccttcttgaagtccaaaagcctctttcaagtgaagagctcttcaatttc
caaaaagaactggagtcaaagaggttaaagcttatagaagcgcaaaggaataaagaatta
gaagaaaagctggagaaaactttaaaagaggttttagaggagagagaaaagcttgtaggt
gagttagaaaaaactgagagagaatatgtagaaaaaggtaaagcgctggatgctttgcag
aaagagattgaagagattgtcaggaagaacatggcgggagaattggcagaaggcctggaa
gagggaatgccttgccccgtatgcgggtcttttcaccacataaatctggcaaagaaagtg
gacgagaagttgattgaggagaaaaagaagctagaaaggggtttaagaactgaaagagaa
gttttacaagaaaagctcattatgctaaaaagtcagctctcaggatttacagcaaaagaa
gagatttcaagggctgagcttgaaaaagcgaaagaaaatttaaggggcattgatttagaa
attttgagaaaagagatagaagagatggaggtaaaatttaaagaagaaaaggaaaaattg
gaggactgggcgaaagaaaaggaggaaaaggagaaagtccttaagagattaaaagaagaa
aaaggacagcttgcattggaagaagctcgcataaaagagagattgcaaaaggatttaaag
cttcttgaggagtataaactttcttttgaagggattgaaagggaatatcagagtctattg
aaagaattagaaaattggaaagaaaagttggggtatgcgaacttttcagaaaaagtagag
gaaatcaatcagaaagaaaaattgattgaaaaactaagagaagaagtagagtccttaaaa
aagaatttagaagaattaaacattaaaagagaaaaagtgttagaagacctcaaccagttg
atagtgaggaagacgcaggtagtagaagtagggaaggaaaaaagaagcgttttagagaag
atgcaaaaagaactctattcgtattctgaagggaaagacgtaaaaaagtatttggaagat
gttcaaaaggaaagagcggaaattctgcagagagagagctttttaaaaaataggctggaa
gaggagaggagaaaaaagcaggaaatagaaagcaaaaaagtctccactttggaaaatcaa
attttattgaccaacatgttgaaggagcaaatagaaaaattggaactttcgctgtcgaaa
gagggctttaagacaaaggaagaggctttaagttttgtgattagcagtgaagagatgagt
gaaattgaaatagaagtaaaaagatttgaaaatgaatacacttctcttgtcgcgaatata
gaaagattggaagggtttcttaagggaaggcaaattgaagaggagcattggaacagatta
gaggaaaggattagagagttggaggagattttgacgggcaaaagaaaagaaattggtgct
acagaaaaggctattcatgatatgaaggaaaacctgaagaaggtagaagagttgaccaaa
aagaaaaaagagttagaacacgtaatagacatgctggaagaactggataaattgttccaa
ggcaataaatttgtggatttcatcgcatcaaaacagctcaaatacattactttttccgct
tcaaaaaggcttaaagaaataagcagaggcaggtacgcactagagattgattctgaaaat
aattttgtaatgagggatgacttcaatggcggtgtaaggcgttctgttgatactttatct
ggtggagagacttttttgacttctttatcacttgctttagctctttcttcccacatacag
ttaaaaggaaaagcacctttagaatttttcttcctggatgagggatttggaagccttgat
tcagaacttcttgacgtagttatgacatcactggaaaggctgaaaaaagataagatggta
gttggcataataagccatgtagaagaactcaaagacagggtccctgtcaagctcatagtg
acgcctcctaccgtttcaggagagggaagcaaagtgaggatagagtatacttaa
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