Caldanaerobacter subterraneus subsp. tengcongensis: TTE1276
Help
Entry
TTE1276 CDS
T00081
Symbol
Nfo
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TTE1276 (Nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE1276 (Nfo)
Enzymes [BR:
tte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TTE1276 (Nfo)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TTE1276 (Nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2145
SAM_2
SAM_1
DUF4230
Motif
Other DBs
NCBI-ProteinID:
AAM24500
UniProt:
Q8RAE7
LinkDB
All DBs
Position
1272032..1272898
Genome browser
AA seq
288 aa
AA seq
DB search
MGIKFGPSGISQSFYDEGHKSSAEMPEWLHKMGLEAYEYSFSRGVRISEKLALQLKENAE
KFNITITIHAPYYINLAAAEEEKIKNSKRYIIESLTAGNLMGAKRVTFHPGSASLDRREA
LDRAKRVLKEVIKEADDLGLGHITLCPETMGKKNQLGTLEEVLELCQLDERLLPTVDFAH
LHARDNGRFKSIEDYEEVLNTIEKYLGKDRAKVIHVHFSRIEFTEQGEKKHWTLLDKEYG
PEFEPLAQLFYERNMEPIVICESRERMAEDALELKRIYQEVAKRVSKT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttggggattaagtttgggccttctggaatctcgcagagcttttacgacgagggacataag
tcttctgctgagatgccagaatggcttcataaaatgggacttgaggcttacgaatactct
ttttctagaggagtgagaataagcgaaaaattagctttgcagcttaaagagaatgcagaa
aaatttaatattacaattacaatccacgctccttattacataaatcttgcggcggcagaa
gaggaaaagataaaaaattctaaaaggtacataattgaaagtttgaccgcagggaatttg
atgggagcaaaaagagttacgtttcaccctggttctgcttctttggacagaagagaagca
cttgatagggcaaaaagagttttgaaggaggttataaaagaagctgatgacttgggactg
ggtcatataaccttgtgtcccgagacgatgggcaagaaaaatcagctgggcactttggag
gaagtcttggaactctgtcagctagatgagagacttcttcctaccgtggattttgcccat
ttgcatgctcgagacaatggaaggtttaaatctatagaagattatgaagaagttttaaac
acgatagaaaaatatctaggaaaagatagggcaaaagttatacacgtccacttcagcaga
attgaatttacagagcagggggaaaagaagcactggacattgcttgataaagaatacggg
cctgaatttgagccgctggctcagcttttttatgaaagaaatatggagcccatagttatt
tgtgaatctcgtgagaggatggcagaagacgcattagaacttaagagaatataccaagag
gtggcaaaaagggtgtcaaaaacatga
DBGET
integrated database retrieval system
