Caldanaerobacter subterraneus subsp. tengcongensis: TTE1387
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Entry
TTE1387 CDS
T00081
Symbol
Pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TTE1387 (Pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tte03019
]
TTE1387 (Pnp)
03016 Transfer RNA biogenesis [BR:
tte03016
]
TTE1387 (Pnp)
Enzymes [BR:
tte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TTE1387 (Pnp)
Messenger RNA biogenesis [BR:
tte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TTE1387 (Pnp)
Transfer RNA biogenesis [BR:
tte03016
]
Prokaryotic type
tRNA degradation factors
TTE1387 (Pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
Par3_HAL_N_term
OB_RRP5_4th
PCB_OB
GcvP2_C
S1_RRP5
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AAM24609
UniProt:
Q8RA43
LinkDB
All DBs
Position
complement(1369755..1371878)
Genome browser
AA seq
707 aa
AA seq
DB search
MEERTFEMELAGRKLVVQTGKVAQQANGAAWVKYGDTVVLVTACASKEPREGIDFFPLTV
EYEERLYSIGKIPGGFIKREGKPSEKAILSARLIDRPIRPLFPEGYRNDVQVIATVLSVD
PDAQPEIVAMIGSSVALSISDIPFNGPTGSVAVGLVDGKFVINPTYEQREKSLMHLVVSG
TKDAIVMVEAGAKEVPEETILDAIVYAHQYIKQIVEFIEGIVKEVGVPKAEVVLHEIDKE
LEEKVRAYATEKIYNALRTPEKKERNDNLDKVEQEVLEHFKDEYPDNLADIDEVLYKIMK
EQMRKMIKEEKIRVDGRGLDDIRPIWCEVGVLPRTHGSAIFTRGQTQVLTVATLGAIGDI
QILEGIGDEEFKRYMHHYNFPPYSVGEVRPLRGPGRREIGHGALAERALEPVIPSEEEFP
YTIRLVSEVLSSNGSTSQASVCGSTLALMDAGVPIKAPVAGIAMGLIKEEDEVLILTDIQ
GIEDFLGDMDFKVAGTEKGVTAIQMDIKIPGIDRDILQMALEKARKARLYVLQKMLEVIK
EPRKELSKYAPRVVRMVVNPEKIRDIIGPAGKTITKIISETGVKIDIEEDGRLYITAPNL
EAGERAKQMIEAITKDIEVGGIYLGKVLRIAPFGAFVEIAPGKEGLVHISNLSKKRVRRV
EDVVKVGDNILVKVTEIDKLGRIVLSRKDAMPDEEESDNRKSDNRKK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgaacttttgaaatggaactagcaggcaggaagcttgtagtccagaccggg
aaagtggcacagcaggccaatggagcagcatgggtgaaatacggcgatacagttgtgctg
gttactgcctgtgcttcaaaagagccgagagaaggaattgactttttccccttgacggtt
gaatacgaagagagattgtattccattgggaaaattcccggcggttttatcaaaagagag
gggaagcccagcgaaaaagctattttatcagctcggttaatagatagacctataaggcct
ctattcccagaaggatacagaaatgacgtgcaggtcatagctactgtgttatcagtggac
cctgatgcgcagccagaaattgtagctatgataggttcttctgttgcgctctctatatcc
gacataccctttaacggccccacaggttctgtggcagtaggcctggtggacggaaagttt
gtcataaatcccacctatgagcagagagaaaagagcttaatgcacttagtagtttctgga
acaaaagatgcaattgtaatggtggaagctggagcgaaagaagtgcctgaggagacaata
cttgatgcgatagtgtatgctcatcaatatataaaacagattgtagaatttatagaaggg
attgtaaaagaagtaggagttcctaaggcagaagtcgtactgcacgaaattgacaaggag
ctggaggaaaaagtaagagcatatgctacagagaaaatatataacgctttaagaactcct
gaaaagaaagagagaaatgacaacttagacaaggtagaacaggaagtacttgagcacttt
aaagatgagtaccccgataatctagcagatattgacgaagtcctctacaaaataatgaaa
gaacagatgagaaagatgataaaggaagaaaagataagggtagatggaagagggcttgac
gatataaggccgatatggtgcgaagtaggagtactgccaagaactcacggttctgctatt
tttacaagaggacaaactcaagtgctcacagtagctactcttggagcaataggtgatata
cagattttagaaggaattggagatgaagaattcaagcgttacatgcaccattacaacttc
ccaccctatagtgtaggagaagtaaggccactgagaggccctggaagaagggaaattgga
cacggagccttggcagaaagggcactagaaccagtaattccttctgaagaagaattccca
tacacaatacgcttagtgtctgaagtattgagctctaacggttctacatcacaggcgagt
gtgtgcggaagcactttggctttgatggacgcgggagtgccaatcaaagcaccggttgct
ggaattgcaatgggactcataaaagaagaagatgaagtactaattctgactgatatacag
ggaattgaggacttcctcggagacatggactttaaagtagctggaacagaaaaaggcgta
actgctattcagatggatatcaaaatacctggcattgatagagatatcctgcaaatggct
ttggaaaaggcaaggaaggcgagactatacgtgctccaaaagatgctggaagtcataaaa
gaaccgaggaaagaactctccaagtatgctcctagagtagtgagaatggtagtcaaccct
gaaaagataagagatatcataggccctgcaggaaagactatcacaaagatcatatctgag
acaggtgtcaaaatcgacatagaagaagacggtcgactgtatataacagctcctaacctt
gaggccggcgaaagagctaaacagatgattgaagctataacaaaggacatagaagttggg
ggaatctatttaggaaaagtgttgagaatcgcgccttttggagcttttgtagagatcgcc
ccaggtaaagaaggattagttcacatttctaacttgtccaaaaagagagtccgccgggta
gaagacgtagtaaaagtgggagacaatatattggttaaggtaacagaaattgacaaactc
ggaagaattgtattgtctcgcaaagacgctatgcctgatgaagaagaaagtgataacagg
aaaagtgataatagaaaaaagtaa
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