Caldanaerobacter subterraneus subsp. tengcongensis: TTE1390
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Entry
TTE1390 CDS
T00081
Symbol
TruB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tte03016
]
TTE1390 (TruB)
Enzymes [BR:
tte01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TTE1390 (TruB)
Transfer RNA biogenesis [BR:
tte03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TTE1390 (TruB)
Prokaryotic type
TTE1390 (TruB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AAM24612
UniProt:
Q8RA40
LinkDB
All DBs
Position
complement(1373262..1374119)
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AA seq
285 aa
AA seq
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MSVDGVLNVLKPPGMTSHDVVDFIRKIYGIKKVGHTGTLDPDAAGVLPVCMGRATKFTSY
LMEHDKRYRFEITFGFSTDTLDKSGKIVESGPVPLFTLEKLQEVLSQFKGEIQQIPPIYS
AKKVKGKKLYEYARKGEEVEIPPIKVTVYELELIKYDAPHHLLLDVKCSKGTYVRALVRD
ICKKLEVPGHMSFLIRTEVGDFDIESSYTLEEIKEGKAEVQPVDKFIKFPSVELDEVSSN
KILNGQFIRNTYNVENSLVKLYDNHGIFIGIGVAEGEKIRPKRLF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggacggcgttttaaatgtgctaaaacctcctggcatgacttctcacgatgtg
gtggattttataagaaaaatttacggtataaagaaagtgggccacacaggaactcttgat
ccagatgcagctggagttttacctgtatgcatgggaagagctactaagttcacttcttac
ctgatggaacatgacaaaaggtacagatttgaaataacttttggtttttctactgatacc
ctagataaaagtggcaaaatcgttgaaagtggccctgttcccttatttactttggaaaaa
ttacaggaagttttaagccagtttaaaggggaaatacaacagataccacccatttattct
gcaaaaaaagtaaaaggaaagaagctctatgaatatgcgagaaaaggcgaagaagtggaa
attccacccataaaagtgacagtttatgagttagaattaataaaatacgatgctccgcac
catctgctgttagatgtaaagtgttccaaaggcacttatgtaagagctcttgtgagagat
atatgcaagaaacttgaagttccaggccacatgtcttttctcataaggacagaggtcgga
gactttgacattgaatcttcatatacgctggaggagataaaggagggaaaggcagaagta
cagcccgtagataagtttataaaatttccttccgtggaacttgatgaagtttcttccaat
aaaattttaaatggccaatttatcagaaatacttacaatgttgaaaattctttagtaaag
ttgtatgataatcatggaatttttataggaattggagtggcagaaggggaaaaaatacga
ccaaaaagacttttctaa
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