Caldanaerobacter subterraneus subsp. tengcongensis: TTE1398
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Entry
TTE1398 CDS
T00081
Symbol
PolC
Name
(GenBank) DNA polymerase III alpha subunit, the Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte03030
DNA replication
tte03430
Mismatch repair
tte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTE1398 (PolC)
03430 Mismatch repair
TTE1398 (PolC)
03440 Homologous recombination
TTE1398 (PolC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tte03032
]
TTE1398 (PolC)
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE1398 (PolC)
Enzymes [BR:
tte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TTE1398 (PolC)
DNA replication proteins [BR:
tte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TTE1398 (PolC)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TTE1398 (PolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
RNase_H_2
tRNA_anti-codon
DEDDh_C
HHH_3
DNA_pol3_a_NI
tRNA_anti_2
Lar_N
Motif
Other DBs
NCBI-ProteinID:
AAM24620
UniProt:
Q8RA32
LinkDB
All DBs
Position
complement(1379781..1383986)
Genome browser
AA seq
1401 aa
AA seq
DB search
MVPATFLENMQIKKVRVEKKSRKLTVVVSSFSSNAQKLSEFQSFLEESFPSLKEIKIVVE
SPSLSTVEEVLENWEKVVLELSEEYPSSLSFLKTCDVAKEGQNRITVKAPTYAIYEMAKS
SKLDFAIREFLRNRYELNLDVELIFSEEGEEIAEKIIEEDIKAIEEVIQKDEKSKKEKSR
SEENRVLLGKEMKAKPISIKDVSAETDEVVIEGEIFSIDFKELKSKVLMVFDITDYTSSI
LVKTFLTEEKYEILKDEIDVGTFVRLRGNVIYDKYEGDLVIDLKDLELIPPKKRMDLSEE
KRVELHLHTQMSTLDAVPSATEVIKRAAEWGHKAVAITDHAVVQAFPEAMEASREYGVKV
IYGMEGYMVDDGIPIVTGESEASLEGEFVVFDIETTGLSNINDEIIEIGAVKIKNKKIVD
TFETFVNPQIPISSFITKLTGIDESMVKDAPLIEEVLPKFLEFAKGAVLVAHNANFDVSF
IKSKAKKLGLTVENTVLDTLELSRHLYQDLKNYKLDTLAEFFEVKLLHHHRAVEDAKATA
EIFIKMLEKLQEIGIKSVSEINSVLMEREVDVKKLPVYHVTILVKDQKGLRNLYEIISRS
NLEFFHRTPRIPKSLLVKMREGLIIGSACEQGEVFRALVSNLEEKKLEDIINFYDYLEIQ
PVGNNEFLIERGEVRSVEELKEINRKIYELGKKYNKLVVATGDVHFLDPWDDVYRKILMA
GKGYKDADRQPPLYFRTTEEMLMEFEYLGEEAAREVVIENPNKIAEIVEDVKPIPEGTFP
PVIEGAEEELRRITLEKAHEIYGDPLPPIVQERLDRELNAIINNGYAVMYVIAQKLVSKS
LQDGYLVGSRGSVGSSLVATMSGITEVNPLPPHYVCPKCKHSEFVTDGSFGCGVDMPDKY
CPNCGTLMKKDGFDIPFEVFMGFEGDKEPDIDLNFSGEYQPIAHRYTEELFGKGHVFRAG
TIGTLADKTAYGYVKKYFEERNLTVHKSEIKRLTMGCTGIKRTTGQHPGGVMVVPKDKSI
YDFTPIQRPADAEDTDVITTHFDYHSLSGKLLKLDILGHDDPTVIRMLEDLTGVNARKIP
LDDKKTMSLFTSVEALGIDPEELGTPVGTLGLPEFGTKFVRQMLIETRPTTFDELVRISG
LSHGTDVWLNNAQDIIREGIATLKEVIAARDDIMLYLISKGMDKKLSFKIMENVRKGKGV
TQEEIEEMKKHGVPDWFIQSCQKIKYMFPKAHAVAYVIMAFRIAYFKVYYPEAFYATYFT
VRADDFNLDIVLGGKESIKRAIKEIEAKGNNATPKEKNLLTVLEVALEMYLRGIKFTNVD
LYRSDAEKFLITEEGLLPPLNSLEGVGIQAAKAIAQERENGKFISIEDFRNRTRVSKTVI
EILKQYGCLEDLPESNQLSLF
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggttccagcgactttcttggaaaacatgcaaataaaaaaagtaagagttgaaaaaaag
agccgaaaactcactgtggttgtctcctctttctcatcaaatgcacaaaagctctcagaa
tttcagtcttttttggaggaaagctttccttctctaaaggagataaagattgtggtggaa
agcccttctttatcaacagtagaagaggttttggaaaactgggagaaagtagtattagag
cttagcgaagagtacccttcttccttaagttttttaaagacctgtgatgtcgcaaaagag
ggacagaataggataactgtaaaggctccaacttacgcaatttacgaaatggctaaaagc
agcaaattagattttgcaataagagaatttttaaggaacaggtatgaacttaatttagat
gtagaacttattttttcagaagaaggggaagaaattgcagaaaaaataatcgaagaagac
ataaaagcaattgaggaagttatccaaaaagatgagaagtctaaaaaggagaagagtagg
tctgaagaaaatagagttctccttggcaaagaaatgaaagctaaacctatctctattaag
gatgtaagtgcagaaaccgatgaggtagtgattgaaggagaaatattttctattgatttt
aaagagttgaagtcaaaagttctcatggtgtttgacattacagattatactagttcaata
cttgtcaaaacctttttgacagaagaaaaatatgaaattttgaaagatgaaatagatgta
ggaacttttgtcaggttaagaggaaatgtgatatacgataagtacgaaggagaccttgta
attgatttgaaagacttagagctcattcctccaaaaaagagaatggatttgtccgaagaa
aagagagtggagcttcaccttcacacccagatgagcactttagatgccgtcccttctgct
actgaagtgataaagagagcggcagaatggggacacaaggctgttgcaataacagaccac
gcagtggttcaagcttttccagaggcaatggaagcatctcgagagtatggggttaaggtt
atatacggaatggaagggtatatggtggatgacggaataccaattgtcactggagaatcc
gaagctagtttggaaggcgaatttgtggtatttgatatcgaaaccacaggcctttcaaac
ataaatgacgagataatagagattggtgctgtcaagatcaaaaacaagaaaatagtagat
acttttgaaacttttgtaaatcctcaaatacccatttcttctttcatcacaaaactcaca
ggaatcgatgaatcaatggttaaagatgctcctttaatagaagaggtgttgcctaaattt
ttggaatttgcaaaaggagcagttctggtagcacacaatgccaattttgatgtgtccttt
attaaatcaaaggctaagaaactaggtttgactgttgaaaacactgtcttagatacgctt
gagttgagcaggcatctgtaccaagatcttaaaaattacaaactcgacactcttgctgaa
ttttttgaagtaaagcttttgcatcaccacagggccgtggaagacgcgaaggctacagca
gaaattttcattaagatgctagaaaagctgcaagaaataggcataaagagtgtaagcgaa
atcaactcggttttgatggaaagggaagtggacgtaaaaaaattgcctgtataccatgtg
acaattttggtaaaggaccagaagggtttaaggaatttatacgagataatatctaggtca
aacctggagtttttccaccgcacccccagaataccaaagagtctgttggtgaaaatgaga
gaagggctgatcatagggtctgcctgtgagcagggagaagtgttcagagccttggtttct
aacttggaggaaaagaagctcgaagatataatcaacttttacgactatttggaaattcag
cctgtggggaacaacgaatttttgattgaaagaggagaggtaagaagcgtagaagaactt
aaagaaataaacagaaagatatacgaacttgggaaaaagtacaacaagctggtagtagca
acaggagatgtgcattttttagacccgtgggacgatgtgtacagaaaaatattaatggcg
ggcaaagggtataaggatgcggacagacagcctcctctttactttaggacaactgaagaa
atgcttatggagtttgaatatctaggagaagaagctgccagagaggtagtcattgaaaat
ccaaataaaattgcggaaattgtggaagatgtaaagcctattcctgagggaacttttccg
cctgtcatcgaaggggcagaagaagaattaagaaggattacccttgaaaaagctcatgag
atatacggtgacccattgcctccaattgtgcaggaaaggcttgacagagagctaaacgcc
ataataaacaacggttacgctgtaatgtacgtaatagctcagaagctagtatcaaagtcg
ctgcaggatggatatttggttggttcaagaggctctgtagggtcttctctggtagctact
atgagcggcattacagaggtaaatccgctgcctcctcattacgtgtgtccaaaatgcaaa
cactcagagtttgtgacggacgggtcttttggctgcggagttgacatgcctgacaagtac
tgccctaactgcggcactttgatgaaaaaagacggctttgacataccttttgaagtgttt
atgggctttgaaggagataaggagccggatatagacctaaacttttctggagaatatcag
cccatagctcacaggtacactgaagaactttttggaaaaggccatgttttcagggcaggt
actattggaacgctggcggataagactgcttacggatatgtgaaaaaatactttgaagag
aggaatttaactgtacacaagtcagaaataaaaaggctgacaatgggatgtacaggcata
aagagaaccacaggacagcatcccggaggagtcatggtggttccaaaggacaaaagcatt
tacgactttactccaattcaaaggcctgcagatgcggaagataccgatgtcataactacc
cattttgattaccattctttgagtggaaagcttctaaaattggacatactggggcatgat
gaccctactgtaataaggatgctggaggatttgacaggtgtaaatgccagaaaaatacct
ctggacgacaaaaagaccatgagcctttttacaagcgtagaagctttgggaatagaccct
gaggaacttggcactcccgttggaacgctagggcttcctgagtttggaacaaagtttgtg
agacagatgctaattgagacccgtcccacaacttttgatgagcttgtcaggataagtggg
ctttctcatggaacagatgtatggttaaataatgcgcaggatataataagagaagggatc
gctactttaaaggaagtaattgctgcaagagacgacataatgctttacttaataagcaaa
ggaatggataaaaagctttcctttaagataatggaaaatgttagaaaaggaaaaggcgtt
acacaggaagaaattgaagagatgaaaaaacacggcgtgcccgactggtttatacagtcc
tgccagaagataaaatacatgttcccaaaagctcacgctgtagcctatgtgatcatggca
tttagaattgcgtattttaaggtgtattatcctgaagctttctatgctacctattttact
gtgagagcagatgactttaacttagacatagttttagggggcaaagagagcataaaaagg
gcaataaaagaaattgaagcgaagggcaacaacgctacaccaaaagagaaaaacttgttg
acagtattagaggtagcacttgagatgtacttaaggggcatcaaattcacaaatgtggac
ctatacaggtccgatgccgagaagtttttaattacagaagaaggacttttgcctccacta
aattctcttgaaggagtgggaatacaggccgcaaaggcaattgcccaggagagagaaaat
ggcaaatttatatccattgaagatttcaggaaccgaaccagggtaagtaaaactgttatt
gaaatattaaaacagtatggatgtttagaagatttgccagaatctaatcaattaagttta
ttttga
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