Caldanaerobacter subterraneus subsp. tengcongensis: TTE1469
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Entry
TTE1469 CDS
T00081
Symbol
Rnc
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TTE1469 (Rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tte03019
]
TTE1469 (Rnc)
03009 Ribosome biogenesis [BR:
tte03009
]
TTE1469 (Rnc)
03036 Chromosome and associated proteins [BR:
tte03036
]
TTE1469 (Rnc)
Enzymes [BR:
tte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TTE1469 (Rnc)
Messenger RNA biogenesis [BR:
tte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TTE1469 (Rnc)
Ribosome biogenesis [BR:
tte03009
]
Eukaryotic type
90S particles
RNase
TTE1469 (Rnc)
Prokaryotic type
rRNA processing factors
TTE1469 (Rnc)
Chromosome and associated proteins [BR:
tte03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TTE1469 (Rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DSRM_CARF
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AAM24691
UniProt:
Q8R9W3
LinkDB
All DBs
Position
complement(1441896..1442582)
Genome browser
AA seq
228 aa
AA seq
DB search
MLTYLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYK
NRKDLEEGSLSKYRAEIVCEPSLARCARKIELGSFLRMGKGEEISGGRDRDSILADAMEA
LLAAVYLDGGLEAVRRVILDLFKEIIDEVLKGIIYRDYKTRLQEVVQSMEVGKITYELVE
EIGPDHNKTFVTQVKIGDVVLGIGQGKSKKESEQAAAMEALSKLGILK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgttgacttatctggaacagaagataaattatgagtttaaagataaaactctgctttta
gaagccctgacccacagttcatgggctcacgaaggcaaaaatgaaaaagtgagcaatgag
agattggaatttttgggcgactctgttttaagccttgtgataagcgaatacctgtataaa
aatagaaaagacttagaagagggttctctttccaagtacagggcagagatagtctgcgag
ccatctcttgctagatgtgctcgaaagattgagttgggcagctttttgagaatgggaaaa
ggcgaagaaatatcaggaggcagggacagggattcaatacttgcggatgcgatggaggca
ttattagctgccgtatatttggatggtggtttggaagctgtcagaagggtgattttagac
ctctttaaggaaatcatagatgaagttttaaaagggataatttacagagactataagacg
aggttgcaggaagtggtacagagcatggaagttgggaagataacctatgagcttgtagaa
gaaataggacctgaccacaacaagactttcgtaactcaagtaaaaattggagatgtagtt
ttaggcataggacaaggaaagagcaaaaaagaatctgaacaggcagctgctatggaagca
ttgagcaagctggggatattgaaatga
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