Caldanaerobacter subterraneus subsp. tengcongensis: TTE1508
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Entry
TTE1508 CDS
T00081
Symbol
PriA
Name
(GenBank) Primosomal protein N (replication factor Y) - superfamily II helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TTE1508 (PriA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tte03400
]
TTE1508 (PriA)
Enzymes [BR:
tte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TTE1508 (PriA)
DNA repair and recombination proteins [BR:
tte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TTE1508 (PriA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
MarR
Zeta_toxin
Zn_ribbon_6
ATPase_2
AAA_19
PIF1
Zn_Ribbon_TF
T4_MRH
AAA_16
ADDB_N
TrwB_AAD_bind
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AAM24726
UniProt:
Q8R9S9
LinkDB
All DBs
Position
complement(1473051..1475249)
Genome browser
AA seq
732 aa
AA seq
DB search
MFAEVIVEIKASNTDRLYTYKVPEGMDLEVGMRVLVPFKNRLVEGYVVSLTDKPSYSLEK
IKSVYKILDKYPIFNEKMIKLAKWMRDYYKCYFSEVFQTIMPAGIDRGEKKVKLVRLKIE
DVFEEDFKKAPRQYEVLRYLKKRSPIKLSELVKILNTDYGTIRALEKKGYIEVYEEEISR
FQVRDVEKTFPPILTEEQKRAVEEVKKSIFSGQPDAYLLFGVTGSGKTEVYLKLIEETVK
IGKSAIVLVPEIALTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNKEVDVVVGV
RSAVFAPFDNLGLIIIDEEHEATYKQSDTRPRYNAKEVAEKRCEIEKAVLVMASATPSLE
TYYKAIKGDYKLLKLTRRIKASMPEIEVVNMSDELAKGNNSIFSRKLFSYIKENLKKGEQ
TILFLNRRGYSSFVACRDCGYVPKCPNCDISLTYHFEDKKLVCHYCGYEEPMRETCPKCG
SKRIRYMGIGTERVEMDIKKFFPEARVLRMDVDTTRRKGSHEKIFYEFKNGKADILIGTQ
MISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKPGRVVIQTYE
DNHYSILTAKEQDYVKFFREEIKYREIFKYPPFAHLMNIVVSGEDEEKVKNASANTYLAC
QKVINKLQVKSYNKILGPAPAPISKINNRYRWQVIVKSEEREVLEEIAEYVQNMKYPKDI
RVAVDIDPLNIM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgaagtcatagtggaaataaaagcttcgaatactgacaggctttatacttac
aaagtgccagaaggaatggaccttgaagtaggtatgagggttttagtgcctttcaaaaat
aggcttgttgagggctatgtggtaagccttacggataagccttcttattcgctagaaaag
ataaagagcgtgtacaaaattttagataaatatcctatttttaacgagaaaatgataaag
ttggcaaaatggatgagagattattataaatgctatttttctgaagtttttcagacgata
atgccggcaggaatagacagaggagaaaaaaaggtaaagctggtcagattgaagatagaa
gatgtttttgaggaggattttaaaaaggctccaaggcagtatgaagtcttgcggtatctt
aaaaagagaagtcctataaagctttccgaacttgtaaagatattaaatacggattatggt
actataagggctcttgagaaaaagggttatatagaggtttatgaagaggaaatatcgaga
tttcaggtgagagatgtagaaaagacctttcctccaattttgacagaagaacagaaaaga
gcagttgaggaggtaaaaaaatctattttctcaggacagcctgatgcatacttgcttttt
ggagttactggcagtggaaagacagaggtttacttaaagctcatagaagaaactgtgaag
ataggaaagagcgcaatagtccttgtgccagaaatagctttaacgcctcagacaattgag
aggtttgtaagccgctttggcaatagagttgctgtgattcacagcgggctttctccggga
gaaaggtttgatgaatggcgaaaagtaaaaaataaagaagtggacgtagtagtaggggta
aggagtgcagtttttgcgccttttgacaaccttggacttataattattgatgaggaacat
gaagctacttacaagcagtcagatacaaggccccggtacaacgcaaaagaagtagcagaa
aagagatgtgaaatagaaaaagctgtattggtcatggcaagcgctactccttctttggaa
acctattacaaagccataaagggcgattacaagcttttgaagcttaccagaagaataaaa
gcctctatgcctgagatagaagttgtcaatatgagcgatgagttagcaaaaggcaacaat
tctatctttagcagaaagttgttttcctatatcaaagaaaatttgaaaaaaggtgagcag
acaattttgtttttaaacagaagagggtattcctcttttgtggcttgcagagactgcggt
tacgttccaaaatgccctaactgcgacatatctttgacatatcactttgaggataagaaa
ctggtgtgtcattactgcggctatgaggagcctatgagggagacatgtcctaagtgcggt
agcaaaaggatacggtatatgggtatcggcacggaaagggtagagatggatataaagaaa
ttctttccagaagctagagttttaaggatggatgtagatactaccaggagaaaggggtcc
catgagaagatattttacgagtttaaaaatgggaaagcagatattttgatagggacacag
atgatatcaaaaggatttgacatacctaatgtgactttagtaggagtgatactcgctgat
ataacattgaacttgccagattttaggtctagtgagaggacttttcaactgctaacgcag
gtggcaggaagagcaggaaggggagaaaagcccggaagagtggtgatacagacatatgag
gataatcattacagcatcctcacggcaaaagaacaggactatgtaaaatttttcagggaa
gagataaaatatagagaaatttttaagtaccctccttttgcacaccttatgaatattgta
gtatcaggggaagacgaagaaaaagtgaaaaatgcctctgcaaacacatatttagcatgt
cagaaagttattaacaaactgcaagttaagagttataataaaatactagggcctgcccct
gctcctataagcaagattaacaaccgatacaggtggcaggtgattgttaaaagtgaggag
agagaggtgctagaagaaattgcagagtatgtccagaatatgaaatatccaaaagacata
agggttgctgtagacattgacccacttaatataatgtaa
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