Caldanaerobacter subterraneus subsp. tengcongensis: TTE2670
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Entry
TTE2670 CDS
T00081
Symbol
CsdB
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
tte
Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte00450
Selenocompound metabolism
tte01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tte00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
TTE2670 (CsdB)
Enzymes [BR:
tte01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
TTE2670 (CsdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
TTE2670 (CsdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Pyridoxal_deC
DUF5601
KYNU_C
SelA
Motif
Other DBs
NCBI-ProteinID:
AAM25789
UniProt:
Q8R6W3
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All DBs
Position
complement(2567800..2569023)
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AA seq
407 aa
AA seq
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MMDVKKIREDFPIFNVKPHGKRLVYLDNAATTQKPESVIKAMEEYYEKMNANVYRSPHYL
SVLSTEAYEKARDKVKKFVNAKSEESIIFTRNTTESINFIAYTWGMKHIKEGDEIVLTIA
EHHSNILPWQMVAEAKGAKLKYVYLDENFRLSMKDFEEKMSDRVKLVAVQHMSNVLGIIN
PVEEITQIAHKYGAKVLVDGAQSVPHMKVDLKKINCDFFAFSGHKMLGPMGIGVLYIKED
LLDEVPPFLRGGEMIDEVYEEYSTFAPPPLKFEAGTPNVEGAYVLISAIDYLERIGLENI
YEHEAKLLEYGLEKINALEYVKTYGPMDSKDRGGIISFNVEGVHPHDVATILDEEGIAVR
SGHHCCQPLMRYLGVPATVRASFYLYNDFDDIDALVEALKKVRKWFK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtgaagaaaataagagaagattttccgatatttaatgtaaagcctcatgga
aagaggcttgtataccttgataatgctgctaccacccagaagcctgagtcggttataaaa
gccatggaagaatattatgagaaaatgaatgcaaatgtgtacagaagccctcattattta
agcgttctatctacagaggcttatgaaaaggcgagagacaaagtgaaaaagtttgtaaat
gcaaagagtgaggagtccattatttttacaagaaatactacagaatcaataaattttatt
gcctacacatggggaatgaagcacataaaagagggggacgagatagttctgacaatagcg
gaacatcacagcaacattcttccatggcagatggtagcagaagcaaaaggagcaaaatta
aaatatgtgtatcttgatgaaaatttcagactttcaatgaaagattttgaagaaaaaatg
tctgatagagtaaaattggtggctgtacagcacatgtcaaatgtcttagggataataaat
cctgtggaagaaattacacaaattgctcataagtatggggcaaaagtgctggtggatggg
gctcagagcgtacctcatatgaaagtggaccttaagaaaataaattgcgactttttcgct
ttttctggccacaagatgttgggccctatgggaattggagttttgtatataaaagaagac
ttattagatgaagtgcctccttttttgaggggaggagaaatgatagacgaggtttatgaa
gaatattccacctttgcacctcctcctttaaaatttgaagcagggactcccaatgtagag
ggagcttatgtactaatttctgcgatagattatcttgaaaggattggacttgagaatata
tatgaacatgaagctaaacttttggagtatggacttgaaaaaattaatgccctcgaatat
gtaaaaacttatgggcctatggattcaaaagacagaggaggaataatttctttcaatgtg
gaaggagttcacccacacgatgttgcgacaatactggatgaagaaggaattgcagtaaga
agcggtcaccactgctgtcagcctctgatgagatatttaggggttcctgccactgtgaga
gccagcttttacctttacaatgactttgatgacatagatgcccttgtggaagcacttaaa
aaagtcaggaagtggtttaaatga
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