Thermogutta terrifontis: THTE_0153
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Entry
THTE_0153 CDS
T05034
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ttf
Thermogutta terrifontis
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttf03019
]
THTE_0153
Enzymes [BR:
ttf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
THTE_0153
Messenger RNA biogenesis [BR:
ttf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
THTE_0153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
nSTAND3
nSTAND_NTPase5
APHB_HrpA
T2SSE
FtsK_SpoIIIE
Cas3-like_C_2
AAA_30
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ASV72755
UniProt:
A0A286R9V6
LinkDB
All DBs
Position
139397..143341
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AA seq
1314 aa
AA seq
DB search
MPSVFREVGRLRKLIAGTMRADRFRFAQRLRLLNHRANRGESLVSELDRLKSEIAASAEL
CRQRREAKPHVEILPHLPIAAQCEAIAAALQENPVVIVCGETGSGKSTQLPKLCLKMGRG
IEAMIGHTQPRRIAARSIAARIAQEMGVTLGREVGYKVRFSDVTSPETYIKLMTDGILLA
ETQSDRFLEHYDTIIIDEAHERSLNIDFLLGYLRRLLQKRRDLKVIITSATLDAARFAEH
FSWRGRPAPVIEVPGRSYPVEVRYRPPVPDEATGEADWQSAILAAMEEVLQEGPGDVLIF
MPTERHIHETTQLLRRQATADPRFRELEILPLYARLSAAEQQRIFEPHSHRRVVVATNVA
ESSLTVPGIRYVIDPGVARLSRYSPRTKTQRLPIEPISQASAEQRKGRCGREGPGICIRL
FSEEDLLQRDRYTPPEIVRTNLASVILQLMALNLGRVETFPFLDPPRADAIRDGYKTLFE
IGAVDEDAKLTPLGRKLARLPVDPRIGRMILAAHDEGCLHEVLIIAAALEVDDPRLRPPE
RAAEADLCHAQFRHPESDFLGYLKLWDFYQSLKAKLSRSQMQKACQQNFLSYNRLREWSD
IFRELQEIVAESGMKLNRRKDDPTAIHRAILTGLLSNVAMRHNRYEYTVAGGGKAVLWPG
SGVFETKPAWVMAAELVETARRYLRVCARIDPAWVEELAPHLIKKTYVDPYWSRRYGAAM
VYEKVLLFGLPVVPRRRVPLGPIDPQTAREMLIQHGLVEGEIECQAAFFEHNQRLVRDLE
TAQIKLRRLDLLLGQWAQFDFYDQRIPSHVYDLQGLLAWWKEACRENPKILHMQPSDVLK
EELPADVSTRFPDHFIVEKAPMPLTYRFQPGHPEDGVTLTIPVEVFHHLDPRRLEWLVPG
MVEPKVAALIRCLPKELRRRLVPIPEKARQAVELMRFGEGRFLPAVAEALSRISGEKIRL
EDFQLDKIPPELQMSIKVVDDKGQVLAQGRDFWQLREKLGSRTTVAYSVIDDPVWTKDHL
RDWPDQDLPEEVEVHRGGIPVKAFPMLVDARDSVSLRLADSAARAAYQTRFGLRRLLAFA
TQERLDPHWDWFPDRDRLRLIATQLPEFDFQDQLLLALVDRAFLDESLVGPWLIGQWGQL
PRTRDEFRRLRHAGLQRLPLAIQEVLSLVRPLLDGYHQARLAVEKLTAPQWEEARRDIEE
QLNELVRPGFLTHTPWNWLRQYPRYFQGICRRAEALQLGNAIRDRQALATFRPYWEAYLK
RRQLHEEMDIFDPELIQLRWMLEEFRISLFAQALGTALPVSPQRLEKQLARVRG
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
ttgccatccgtatttcgggaagttggacgccttcgcaaactgatcgccggcaccatgcgt
gccgaccgctttcggtttgcgcagcggttgcggcttctcaatcaccgggcgaaccggggt
gaatccctcgtctctgaactcgaccgtttgaagagcgaaattgctgcctcggccgaactc
tgccgtcaacgccgggaagccaaaccgcatgtggaaatccttccccatctaccgatcgcc
gctcaatgtgaagcgattgccgcggccctccaggaaaatccggtggtcattgtgtgcggg
gaaacgggctcgggcaaatcgacccagcttcccaaactgtgcctgaaaatggggcggggt
attgaggcgatgatcggacatacgcagccccgacgcatcgccgcccgctccatcgccgct
cgcattgcccaggaaatgggcgtgacgctcggtcgtgaggtgggttacaaagtgaggttc
tccgacgtgacctccccggagacctacatcaagctcatgaccgacgggattctcctcgcg
gaaacccaatcggatcgattcctcgaacattacgacacgatcatcatcgacgaagcccat
gagcggtcactgaacattgattttcttctgggttacctgcggcgtctgttgcaaaagcgg
cgggatctgaaggtaatcatcacctccgcgaccctggatgccgcgcgattcgccgagcat
ttttcctggcgtggccgccctgctccggtgatcgaagtccccggccgatcctatcccgtg
gaagttcgctaccgcccccctgtcccggacgaagccaccggtgaggccgactggcaatcg
gcgatcctcgccgcgatggaagaagtccttcaggaaggcccgggggatgtgctcatcttc
atgcccacggagcggcacattcacgagacaactcaactcctgcggcgtcaggcgacggct
gatccgcgtttccgagagttggaaatcctccctctctatgcccggctttctgctgccgag
cagcagcggatcttcgagccgcattcgcaccgccgggtagtggtggccaccaatgtcgcc
gagtcatcgctcaccgtccccgggattcgctacgtgatcgacccgggagtcgcccgactg
agtcggtactctccccgcaccaagacccagcggttgccgatcgaaccgatttcacaggcc
tccgcggagcagcggaaaggtcgctgcggccgggaggggcccggcatctgcattcgactt
ttcagcgaagaggaccttctgcaacgcgatcgctacaccccgcccgagatcgtccgcacc
aacctggcctcggtgatcctccagcttatggcgctcaatctgggccgggtggaaacattt
cctttccttgatcctccccgggccgatgcaatccgggacggatacaagacccttttcgaa
atcggtgcggtggacgaggacgcaaagttgacccctttgggacgcaaacttgcgcgactg
cccgtcgatccgcgcatcgggcgaatgattcttgctgcccacgatgaaggatgccttcac
gaggtgctcatcattgcggcagctctggaggtggatgatccgcggctccgtcctcccgag
cgggcggccgaggccgacctctgccatgcccagttccgccatccggagtccgacttcctc
ggctatctcaaactctgggacttctatcagtccctgaaagccaagctctcccggagccaa
atgcaaaaggcctgccagcagaatttcctgtcctacaatcgactccgtgagtggtcggat
atttttcgcgaattgcaggagatcgtggccgagtccgggatgaaactcaaccgccgcaag
gacgatcccacggcaatccaccgggcgatcctcaccggactgttgtccaacgtggccatg
cggcacaaccgctacgagtacaccgtggccggaggtggcaaggccgttctctggccgggg
tccggcgtctttgaaaccaaacctgcctgggtgatggccgccgaactggtggaaaccgcc
cgccgctatctgcgggtgtgcgccaggatcgatcccgcctgggtggaagaactcgcgccc
catctgatcaaaaaaacctacgtggatccgtactggagtcggcgttacggggcggccatg
gtctatgagaaagtgctccttttcggcttgcccgtcgtgccccgacgacgagtcccgctg
ggacctatcgatcctcaaaccgctcgggaaatgctcattcagcacggtctcgtggagggc
gaaatcgagtgccaggcggcctttttcgagcacaaccagcggctggtgcgagacctggaa
accgcccagatcaagctccgacgcctggacctgcttctcggtcaatgggctcagttcgac
ttctacgaccagcggatcccctcgcacgtgtacgatctccagggactcctcgcctggtgg
aaggaagcgtgcagggaaaatccgaaaattctccacatgcaaccgtcggacgtcctgaag
gaggagctaccggccgacgtgtccacgcgttttcccgaccacttcatcgtggaaaaggcc
cccatgcctctgacctatcgcttccagccgggacatcccgaagatggggtcaccctcacc
atccccgtggaagttttccatcacctggacccgcgacgtttggagtggctggtcccgggg
atggtggaaccgaaggtggccgccctcatcaggtgcctccccaaggaactacgtcggcga
ttggtgcccatccccgagaaagcgcggcaagccgtggagctgatgcggttcggagaaggc
cgattcctgccggctgtggcggaagccctctcgcggatttctggtgaaaaaatccgtctg
gaggatttccagcttgacaagatcccccctgaactgcaaatgtccatcaaggtggtggac
gataagggacaggttctggcacagggccgggacttctggcaactgcgtgaaaaattggga
agccggaccacggtcgcctattcggtcatcgacgatcccgtctggacgaaagaccatctc
cgtgattggcccgatcaggacctccccgaagaagtggaagtacaccgcggcggcattccg
gtgaaggcgttcccgatgctggtggacgcgagggactcggtgtccttacgactggccgac
agtgccgcccgggcggcctaccagacccggttcggtctccgccgcctgctcgccttcgcc
acccaggaacgtctcgatccccattgggattggtttcccgatcgggatcgcctccggctc
atcgcaacgcaacttccggaattcgacttccaggaccagcttctccttgccctcgtcgat
cgcgcgttcctggacgagagtctggttgggccgtggctgatcgggcagtggggccagctt
ccccggacccgcgacgagttccgacgtctccgtcacgccggtctgcaacgcttgccgctg
gccatccaggaagtgctgtcgctggttcggccgcttcttgatggctaccaccaggcacgt
ctggccgttgaaaaactcactgcgccccaatgggaagaggcccgccgggatatcgaggag
caattgaacgagctggtgcgtcccggattcttaacccacacgccatggaactggcttcgc
cagtatccgcggtatttccagggaatttgtcgtcgggcggaagccctgcaactgggcaat
gcgatccgtgaccggcaggccctggccaccttccgcccctactgggaagcgtaccttaag
cgccgtcaacttcacgaggaaatggacattttcgatcccgaactgattcagctccgctgg
atgctggaagaattccgcatttccctctttgcccaggcactgggtaccgccctgcctgtg
tctccgcaacggctggaaaagcaactcgcccgcgtccggggatag
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