Thermogutta terrifontis: THTE_1123
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Entry
THTE_1123 CDS
T05034
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
ttf
Thermogutta terrifontis
Pathway
ttf02020
Two-component system
ttf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THTE_1123
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
THTE_1123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttf03021
]
THTE_1123
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ttf02035
]
THTE_1123
Transcription machinery [BR:
ttf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THTE_1123
Bacterial motility proteins [BR:
ttf02035
]
Flagellar system
Flagellar assembly proteins
Stator
THTE_1123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
GerE
HTH_23
PCI
Motif
Other DBs
NCBI-ProteinID:
ASV73725
UniProt:
A0A286RCN8
LinkDB
All DBs
Position
1112207..1112989
Genome browser
AA seq
260 aa
AA seq
DB search
MPTTVAPEDVEQLWIEFKKNPQNQELRNRLIEIYLPLVKYNAERIWARLPEGVELDDLIS
AGVFGLMDAIDAFDLSRGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKASKLNEACKA
LEAKLGRQPSDSELAEELGMTIEELEKMKMEASAVNLISLNKKWYETDSYKDVREIDILE
DKKGEDPTRRIEKSDLMRLITKGLSRNERLILILYYYEELTMKEIGATLDLSESRVSQMH
SAIVQRLQQQLTRRRAELGT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccactgtcgctccggaggatgtggagcagctttggatcgagttcaagaaaaac
cctcaaaatcaggaattgcgcaatcgtcttattgaaatctacctgcccctggtgaaatac
aacgccgaacgaatctgggcgagactgcctgaaggcgtcgagctggacgatctcatttcg
gcgggtgttttcggcttgatggacgccattgacgccttcgatctttcccggggtgtcaag
tttgaaacatattgtgttccccggattcgtggggcgatgctggacgaacttcgcaccatg
gactgggttccgcggttggtgcgatcgaaggccagcaagctcaacgaggcgtgcaaagcg
ctggaagccaaattggggcgtcagccgagtgactccgaattggccgaagagctgggcatg
acgatcgaagagctggaaaagatgaagatggaggccagtgccgtcaacctcatcagcctc
aacaagaagtggtacgaaacggacagctacaaagacgtccgggaaatcgacatcctggag
gataaaaagggtgaagaccccacccgccggattgaaaaaagcgatctcatgcgcttgatc
accaagggactcagtcggaacgagcgactcatcctcatcctgtattactatgaagagctg
acaatgaaagaaattggcgcgacgctcgatctctcggaaagccgcgtcagccagatgcac
agcgccattgtccagaggctacagcagcaactcacacgtcgccgtgccgaactgggcacg
taa
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