Thermogutta terrifontis: THTE_2022
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Entry
THTE_2022 CDS
T05034
Name
(GenBank) Integration host factor alpha/beta
KO
K05788
integration host factor subunit beta
Organism
ttf
Thermogutta terrifontis
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttf03032
]
THTE_2022
03036 Chromosome and associated proteins [BR:
ttf03036
]
THTE_2022
03400 DNA repair and recombination proteins [BR:
ttf03400
]
THTE_2022
DNA replication proteins [BR:
ttf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
THTE_2022
Chromosome and associated proteins [BR:
ttf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
THTE_2022
DNA repair and recombination proteins [BR:
ttf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
THTE_2022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF4777
DUF4011
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ASV74624
UniProt:
A0A286RF88
LinkDB
All DBs
Position
2074173..2074502
Genome browser
AA seq
109 aa
AA seq
DB search
MTKRDIVRQIAEELGLPQSQTREVVQRTFDAIIDILTTEHKIELRNFGVFKIKLRKSRRA
MNPKKKTEIRVPEKFVVRFKPGKELRKRLEAMSKKLKSATKESVPRTPA
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
gtgactaagcgagatatcgtgcgacagattgcggaggaactaggactcccccagtcgcag
acgcgagaggttgttcagcgcacatttgacgccatcatcgatatcctgacgacggaacac
aaaattgagctgagaaacttcggggttttcaagattaagctgcgaaaatcgcgacgagcg
atgaatccgaagaaaaaaacggagattcgggtcccagagaagtttgtggtccgctttaaa
cccggcaaggagttgagaaaacgactggaggcgatgtcgaaaaagctcaaatccgcgact
aaggaaagcgttcccaggacgcccgcctga
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