Thermogutta terrifontis: THTE_2238
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Entry
THTE_2238 CDS
T05034
Name
(GenBank) DNA-directed RNA polymerase alpha subunit domain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ttf
Thermogutta terrifontis
Pathway
ttf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THTE_2238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttf03021
]
THTE_2238
03400 DNA repair and recombination proteins [BR:
ttf03400
]
THTE_2238
Enzymes [BR:
ttf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THTE_2238
Transcription machinery [BR:
ttf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THTE_2238
DNA repair and recombination proteins [BR:
ttf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THTE_2238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_19
TPR_8
TPR_16
TPR_6
TPR_17
TPR_14
TPR_12
ANAPC3
TPR_7
TPR_11
TPR_9
ARM_TT21_N
MIT
HEAT_Nup120
TPR_CcmH_CycH
SAM_EPH
TPR_Slam
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ASV74840
UniProt:
A0A286RFV4
LinkDB
All DBs
Position
complement(2316018..2317355)
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AA seq
445 aa
AA seq
DB search
MSQAALETDVKQIVLSNSLFGPREVQALASAMAEDPSQYRALRDAVAELELREETPASNV
RLGCCLYLLGRFESAISVLKRGDNGALAHFYLGKCYLATQRYDEALESFRAARIAGYNPD
DCALGEVEALRGKGELKGAMEILDRLSGSAAESAEYYYQRGATLAALGAPAEEVAALYEK
AIQIDPNHVGALFGLAWENDRHGNDDVALELYQRCVSRFPPHLGALINLGILYEDMEQYE
KAVRCYQRVLEAFPGHERARLFLKDAQAAGQIVLEEDTTRRRDRLAQILATPVTDFELSV
RSRNCLQKMGIMTLGDLCRCTEQDLLASKNFGETSLAEIKEMLASKGLRLGQLLPERPGA
PAAEGVGEEEEALPPEEQALLAKPVSELNLSVRARKCLARLGINTVGELIRYSGDELLEC
KNFGVTSLNEVREKLRALGLKLRGD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcggcgttggagactgacgtcaagcaaatcgtcctcagcaactctctgttt
ggcccacgagaggttcaggcgctggccagtgccatggcggaggacccctcccaatataga
gcactccgcgacgcagtcgctgaactggaacttcgcgaagagactccggccagtaatgtc
cgactcggctgttgcctctatctgctggggcgtttcgaaagcgctatttccgtcctcaaa
cgaggggataacggtgcgctcgcccatttctaccttggaaagtgttatctagctactcaa
aggtacgacgaggcactggagagttttcgggcggcaagaatcgctggctacaacccggat
gattgcgctctcggggaagtggaggctctgcgggggaaaggagagctcaagggggcgatg
gagatcctcgatcggctttctggttccgccgccgaaagtgccgagtattactaccagcgt
ggtgccacgctggcagcgttgggtgctcccgccgaagaagtagccgcgctttatgaaaag
gcgattcaaattgatcctaaccacgtgggcgcacttttcggattggcgtgggaaaatgac
cgtcatggcaacgacgacgtcgctctcgaactttaccaaagatgcgtatcgcggtttccg
ccgcacctgggtgcgctcatcaatctgggcattctttacgaggatatggagcagtacgaa
aaggctgtccgctgctatcagagggtgttggaggcctttccggggcatgagcgtgcgcgg
ctgttcttgaaagacgcccaggcggccgggcagattgttctcgaagaggataccacccga
cgtcgagatcgcctcgctcagattctcgccacccctgtcacagattttgaactctccgtc
cgcagccgtaactgcctccagaaaatgggcatcatgacgttgggcgatctgtgccgctgc
accgagcaagacctcctggccagcaagaatttcggtgaaacgagtctcgccgaaatcaaa
gagatgctggcatccaaagggctccgtctcgggcagctgctccccgagcgtccaggcgcg
cctgccgcagagggcgttggggaagaggaagaagccctgcctcccgaggaacaggcactc
cttgccaaaccggtctccgagctgaatctttccgtgcgtgcacggaagtgtctcgcccgg
ctgggaatcaatacagttggagaactgatccgttacagcggcgatgaattactggagtgc
aagaacttcggcgtaaccagcctcaacgaggttcgcgaaaagctgcgagcgttaggactc
aagcttcgcggggattga
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