Thermogutta terrifontis: THTE_2404
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Entry
THTE_2404 CDS
T05034
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ttf
Thermogutta terrifontis
Pathway
ttf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THTE_2404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttf03400
]
THTE_2404
DNA repair and recombination proteins [BR:
ttf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THTE_2404
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
THTE_2404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
SMC_N
AAA_16
UvrA_inter
DnaJ_CXXCXGXG
AAA_29
RsgA_GTPase
AAA_25
nSTAND1
AAA_23
AAA_33
Zn_ribbon_8
Anti-TRAP
Resolvase
MeaB
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ASV75006
UniProt:
A0A286RGD2
LinkDB
All DBs
Position
2514980..2518063
Genome browser
AA seq
1027 aa
AA seq
DB search
MSSPRRSIIIRGARTHNLKSVDVEIPKGKLTVLCGPSGSGKTSLAFDTLYVEGQRRYIES
LSARIRQHFEDLPRPDVDFIGNLSPTVAVGNQTQTRGIRGDVAQLTEIFDFLRLLYTHLG
EIFCPDCGWPVRSWDSQAIAETLQADWLKGRRAIVAFNVAEGFSTASDPVDRLKETAAKL
AADGWTRVLLGNRIFAVEDVPALITEAGLSNREASLGGQAAVENGHDQLLAVIVDRIQLG
SCPESRLRESVETALAQGTGKCLVFVEKRDSASCTGRPGEFCSERGTLVGEVVWKSCRLD
DREWLRAEFARQFVCPTCGQVFARPEPNLFNSRTAIGACPRCQGTGKVATLDPAKVFPDF
HLSLEKGAIAPLRRAGLSRFQEELLRQAKEFGIPVDQPVCDLTPEQLGLVLYGSEERGVA
GLEGILRKLERQRHQFAWRAWMQQWKIEIRCPQCRGTQLSREALSVFLESRWQKVERPGE
KNELRIPAANHEDGGGLVQRLNIRQFCSLTVDEAIEFVHHLVSRRPETRQAVYCREAILQ
RLLSLRELGLGHINLDRAGNSLSSGELRRTLLAAALGSGLKQVVYILDEPSAGLHPRDRS
ALRRMIHHLRDRGNTVVVIEHDEALIREADLVIELGPGAGERGGEVVFQGSPKDLANAST
LTAEYINHRRQIAFTRPRRQAQGWIRLAGASGHNLKDITVEFPLGVLCAVTGVSGAGKST
LVEKTLYPALVQKLRGVGPQPLPFSDLLGEKQIGDVVLVDQTIPGKTWRSNPATFIKAFD
EIRKVFAQSSDARVRGYGVSHFSFNSREGQCPRCEGEGFLEIDMVFLPNMEISCPECEGT
RYRQEILAISYRGKNIADILHMTVREAYFFFRGEPQIQGKLRRLMDVGLDYVRLGQPMAS
LSSGESQRLKLASYFSRSRKKPTLFILNEPTRGLHPHDIHQLMECFDTLISLGHSLLVIE
HNLALVASADYVIDLGPGAGLEGGRVVAHGTPEEIAACPDSVTGQFLLKILEGRSSPESR
SRTQRVE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccacgacgtagcatcattattcgcggtgcccgcacccacaacctcaagtcc
gtcgatgtcgaaataccaaaaggaaaactgaccgtcctctgtgggcccagtggcagtggt
aaaaccagtctcgccttcgacacgctctacgttgaggggcagcgccggtatatcgaaagt
ctgtccgcgcgaattcgccagcatttcgaagatttaccccgcccggatgtggactttatc
ggcaatctttcacccacggtggccgtgggtaaccagacgcaaactcggggaataagggga
gacgtcgcccaactaacggagattttcgactttcttcggctgctctacacgcacctgggg
gaaatcttctgccctgattgcggttggcctgtccggagttgggattcacaggccattgcc
gaaaccttgcaagcggactggctgaaaggccgtcgcgcgatagtggcctttaacgtggcg
gagggattttccacggcctcagaccccgttgatcgcttaaaggaaaccgcagcgaaactg
gcagcggacggttggacccgagtcctcctgggcaaccgaatcttcgccgttgaagacgtt
ccggcattgatcacggaagcgggcctcagcaatcgtgaggcttctctagggggacaagca
gcggtagagaatggccatgaccaactcctggctgtgatcgtggaccggatccaactggga
agttgtcccgagtcgcgacttcgtgagtccgtggagacggccctcgcgcagggtaccgga
aagtgccttgtttttgtggagaaaagagactccgcatcgtgcacagggagaccaggggaa
ttttgttctgagcgggggactttggttggggaggttgtctggaaatcgtgcaggctcgat
gatcgggaatggctccgagccgagtttgcccgccagttcgtttgtcctacctgcgggcag
gtcttcgcgaggcccgaacccaacctctttaacagccgcacggcaatcggtgcgtgtcct
cgctgccagggcacaggaaaagtcgccacgctggatcccgccaaggtgtttccggatttc
catttgagcctggaaaaaggggcaatcgccccgctgcgcagggctggactgagccgattt
caggaggaacttcttcgtcaagctaaggagttcgggattcccgtggaccagccggtttgt
gatttgactcctgaacaactggggctggttctctacgggagcgaggaaaggggggttgct
gggcttgaaggaattctgcggaaattggaaaggcagcgtcaccaatttgcttggcgggcc
tggatgcaacaatggaagatcgaaatccgctgtccccagtgccgcggtacgcagctttca
cgtgaggccttgagcgtctttttagaaagccgttggcaaaaggttgaaaggccaggcgaa
aagaatgagctgagaattcccgcggcgaaccacgaagacgggggaggtttggtacaaagg
ctcaacattcggcagttctgcagcctcaccgttgatgaagcgattgagttcgtccaccat
ctcgtttctcgtcgcccggaaacacgccaggcggtctactgccgggaagcaatccttcaa
cgacttctttcactccgtgagcttggccttggccatatcaatctcgaccgggcgggtaac
tccctcagtagcggggagttgcggcgaacgcttcttgcggcggctctggggtccggcctg
aaacaggtggtctacatcctcgatgagccgtccgcaggactgcatccacgggatcggtcg
gcacttcgccggatgatccatcatctccgcgaccgtggaaacacggtggtcgtgattgaa
cacgacgaagcgcttatccgtgaggcagacctcgttattgaactcggaccgggagccgga
gagcgtggaggtgaagttgtctttcagggatcgccgaaagatctggccaacgcctccact
ttgaccgcggaatacatcaaccatcggcgtcagatcgcgttcacccgtccccgccgtcag
gcccaggggtggattcggctggcgggagcctccgggcataatctcaaagacatcacggtg
gaatttcccctgggcgttctctgtgcggtgacaggggtcagcggggcagggaaaagcact
cttgtggagaaaaccctttatccagccctcgtgcagaaacttcgcggcgtgggtccgcag
ccccttccgttttcggatctgctgggagaaaaacagattggtgacgtcgtccttgttgac
cagactatccccgggaaaacctggcgttctaaccccgccacttttatcaaagcttttgac
gaaatcaggaaagttttcgctcagagcagcgatgcccgggtccgcgggtatggggtgagt
cacttcagtttcaattcccgtgaaggccagtgtccgcgatgcgaaggagaaggttttctg
gaaattgatatggtttttctgcccaatatggagatttcctgtccggaatgcgaaggcacc
cgctatcgacaggagatcttggccatctcgtaccgcggaaagaacatcgcagatattctt
cacatgaccgttcgcgaggcgtacttttttttccgcggggaaccgcagatccagggcaaa
ctgcggcgattgatggacgttgggctggattatgttcgcttgggccaaccaatggcaagc
ctatccagtggggagtcccagcgtctgaaactggcctcgtatttctcccgctcacgaaaa
aaaccaactctctttattctcaacgaacccacaaggggactccacccccacgatattcac
cagcttatggaatgctttgacacacttatatccctgggacactctcttctggtgatcgag
cacaatcttgctctggttgcctccgccgactacgtcatcgatctcggcccgggcgcaggt
ctcgagggcggccgcgttgttgcccacggaacgcccgaagaaatcgcggcctgcccagac
tcagttacggggcaattccttcttaaaatactggagggacggagtagcccggaaagtcga
tcacggacacaacgtgtcgaatga
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