KEGG   Thermogutta terrifontis: THTE_2404
Entry
THTE_2404         CDS       T05034                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ttf  Thermogutta terrifontis
Pathway
ttf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ttf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    THTE_2404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ttf03400]
    THTE_2404
DNA repair and recombination proteins [BR:ttf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     THTE_2404
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      THTE_2404
SSDB
Motif
Pfam: ABC_tran AAA_21 UvrA_DNA-bind SMC_N AAA_16 UvrA_inter DnaJ_CXXCXGXG AAA_29 RsgA_GTPase AAA_25 nSTAND1 AAA_23 AAA_33 Zn_ribbon_8 Anti-TRAP Resolvase MeaB BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: ASV75006
UniProt: A0A286RGD2
LinkDB
Position
2514980..2518063
AA seq 1027 aa
MSSPRRSIIIRGARTHNLKSVDVEIPKGKLTVLCGPSGSGKTSLAFDTLYVEGQRRYIES
LSARIRQHFEDLPRPDVDFIGNLSPTVAVGNQTQTRGIRGDVAQLTEIFDFLRLLYTHLG
EIFCPDCGWPVRSWDSQAIAETLQADWLKGRRAIVAFNVAEGFSTASDPVDRLKETAAKL
AADGWTRVLLGNRIFAVEDVPALITEAGLSNREASLGGQAAVENGHDQLLAVIVDRIQLG
SCPESRLRESVETALAQGTGKCLVFVEKRDSASCTGRPGEFCSERGTLVGEVVWKSCRLD
DREWLRAEFARQFVCPTCGQVFARPEPNLFNSRTAIGACPRCQGTGKVATLDPAKVFPDF
HLSLEKGAIAPLRRAGLSRFQEELLRQAKEFGIPVDQPVCDLTPEQLGLVLYGSEERGVA
GLEGILRKLERQRHQFAWRAWMQQWKIEIRCPQCRGTQLSREALSVFLESRWQKVERPGE
KNELRIPAANHEDGGGLVQRLNIRQFCSLTVDEAIEFVHHLVSRRPETRQAVYCREAILQ
RLLSLRELGLGHINLDRAGNSLSSGELRRTLLAAALGSGLKQVVYILDEPSAGLHPRDRS
ALRRMIHHLRDRGNTVVVIEHDEALIREADLVIELGPGAGERGGEVVFQGSPKDLANAST
LTAEYINHRRQIAFTRPRRQAQGWIRLAGASGHNLKDITVEFPLGVLCAVTGVSGAGKST
LVEKTLYPALVQKLRGVGPQPLPFSDLLGEKQIGDVVLVDQTIPGKTWRSNPATFIKAFD
EIRKVFAQSSDARVRGYGVSHFSFNSREGQCPRCEGEGFLEIDMVFLPNMEISCPECEGT
RYRQEILAISYRGKNIADILHMTVREAYFFFRGEPQIQGKLRRLMDVGLDYVRLGQPMAS
LSSGESQRLKLASYFSRSRKKPTLFILNEPTRGLHPHDIHQLMECFDTLISLGHSLLVIE
HNLALVASADYVIDLGPGAGLEGGRVVAHGTPEEIAACPDSVTGQFLLKILEGRSSPESR
SRTQRVE
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgtcttccccacgacgtagcatcattattcgcggtgcccgcacccacaacctcaagtcc
gtcgatgtcgaaataccaaaaggaaaactgaccgtcctctgtgggcccagtggcagtggt
aaaaccagtctcgccttcgacacgctctacgttgaggggcagcgccggtatatcgaaagt
ctgtccgcgcgaattcgccagcatttcgaagatttaccccgcccggatgtggactttatc
ggcaatctttcacccacggtggccgtgggtaaccagacgcaaactcggggaataagggga
gacgtcgcccaactaacggagattttcgactttcttcggctgctctacacgcacctgggg
gaaatcttctgccctgattgcggttggcctgtccggagttgggattcacaggccattgcc
gaaaccttgcaagcggactggctgaaaggccgtcgcgcgatagtggcctttaacgtggcg
gagggattttccacggcctcagaccccgttgatcgcttaaaggaaaccgcagcgaaactg
gcagcggacggttggacccgagtcctcctgggcaaccgaatcttcgccgttgaagacgtt
ccggcattgatcacggaagcgggcctcagcaatcgtgaggcttctctagggggacaagca
gcggtagagaatggccatgaccaactcctggctgtgatcgtggaccggatccaactggga
agttgtcccgagtcgcgacttcgtgagtccgtggagacggccctcgcgcagggtaccgga
aagtgccttgtttttgtggagaaaagagactccgcatcgtgcacagggagaccaggggaa
ttttgttctgagcgggggactttggttggggaggttgtctggaaatcgtgcaggctcgat
gatcgggaatggctccgagccgagtttgcccgccagttcgtttgtcctacctgcgggcag
gtcttcgcgaggcccgaacccaacctctttaacagccgcacggcaatcggtgcgtgtcct
cgctgccagggcacaggaaaagtcgccacgctggatcccgccaaggtgtttccggatttc
catttgagcctggaaaaaggggcaatcgccccgctgcgcagggctggactgagccgattt
caggaggaacttcttcgtcaagctaaggagttcgggattcccgtggaccagccggtttgt
gatttgactcctgaacaactggggctggttctctacgggagcgaggaaaggggggttgct
gggcttgaaggaattctgcggaaattggaaaggcagcgtcaccaatttgcttggcgggcc
tggatgcaacaatggaagatcgaaatccgctgtccccagtgccgcggtacgcagctttca
cgtgaggccttgagcgtctttttagaaagccgttggcaaaaggttgaaaggccaggcgaa
aagaatgagctgagaattcccgcggcgaaccacgaagacgggggaggtttggtacaaagg
ctcaacattcggcagttctgcagcctcaccgttgatgaagcgattgagttcgtccaccat
ctcgtttctcgtcgcccggaaacacgccaggcggtctactgccgggaagcaatccttcaa
cgacttctttcactccgtgagcttggccttggccatatcaatctcgaccgggcgggtaac
tccctcagtagcggggagttgcggcgaacgcttcttgcggcggctctggggtccggcctg
aaacaggtggtctacatcctcgatgagccgtccgcaggactgcatccacgggatcggtcg
gcacttcgccggatgatccatcatctccgcgaccgtggaaacacggtggtcgtgattgaa
cacgacgaagcgcttatccgtgaggcagacctcgttattgaactcggaccgggagccgga
gagcgtggaggtgaagttgtctttcagggatcgccgaaagatctggccaacgcctccact
ttgaccgcggaatacatcaaccatcggcgtcagatcgcgttcacccgtccccgccgtcag
gcccaggggtggattcggctggcgggagcctccgggcataatctcaaagacatcacggtg
gaatttcccctgggcgttctctgtgcggtgacaggggtcagcggggcagggaaaagcact
cttgtggagaaaaccctttatccagccctcgtgcagaaacttcgcggcgtgggtccgcag
ccccttccgttttcggatctgctgggagaaaaacagattggtgacgtcgtccttgttgac
cagactatccccgggaaaacctggcgttctaaccccgccacttttatcaaagcttttgac
gaaatcaggaaagttttcgctcagagcagcgatgcccgggtccgcgggtatggggtgagt
cacttcagtttcaattcccgtgaaggccagtgtccgcgatgcgaaggagaaggttttctg
gaaattgatatggtttttctgcccaatatggagatttcctgtccggaatgcgaaggcacc
cgctatcgacaggagatcttggccatctcgtaccgcggaaagaacatcgcagatattctt
cacatgaccgttcgcgaggcgtacttttttttccgcggggaaccgcagatccagggcaaa
ctgcggcgattgatggacgttgggctggattatgttcgcttgggccaaccaatggcaagc
ctatccagtggggagtcccagcgtctgaaactggcctcgtatttctcccgctcacgaaaa
aaaccaactctctttattctcaacgaacccacaaggggactccacccccacgatattcac
cagcttatggaatgctttgacacacttatatccctgggacactctcttctggtgatcgag
cacaatcttgctctggttgcctccgccgactacgtcatcgatctcggcccgggcgcaggt
ctcgagggcggccgcgttgttgcccacggaacgcccgaagaaatcgcggcctgcccagac
tcagttacggggcaattccttcttaaaatactggagggacggagtagcccggaaagtcga
tcacggacacaacgtgtcgaatga

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