Thermogutta terrifontis: THTE_3862
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Entry
THTE_3862 CDS
T05034
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ttf
Thermogutta terrifontis
Pathway
ttf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THTE_3862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttf03400
]
THTE_3862
DNA repair and recombination proteins [BR:
ttf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THTE_3862
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
THTE_3862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_16
AAA_21
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_23
nSTAND3
RsgA_GTPase
AAA_28
AAA_25
Cas12f1-like_TNB
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-ProteinID:
ASV76463
UniProt:
A0A286RKG2
LinkDB
All DBs
Position
4143030..4145915
Genome browser
AA seq
961 aa
AA seq
DB search
MPDKDELSVEATLINVRGARVHNLKNVDVSIPLGRLVVITGPSGSGKSSLAFDTLHAEGQ
RQYLETLTPHLRRFIPQLERPDVDWVEGLPPTVAIDQRGGPPPPRSTVGTLTEVYDLLRL
LYVRVGELQCPKCLVPVVSQSPQEICQAILSLPEGTRLILLAPIPIKKSRKAPELVATIR
KLGFPRVRLNGQLCDLDDLTPKTLEGQCRVEVVVDRVIIKPAVETRLRESLHTTLRISDG
QAIVSYEVAGEGGEPVWVDQVFSTVRRCSRCGEIYPEVDLRTLSFFSPHGACPQCEGLGV
VDRFDPNLVIDFSRGLENGAVRLWKDARAKLKHHAKKIERLMKQGGFDWSTPLEKIPEEF
RAKLIFGARPSDQNSDRSPANSQPTRRTRSTEFVGLLQLLEVEYELLAEDWQRREWAAYR
SQVACPSCQGARLGALGRSVMIEGVPIHALCAWTIPEVRAFLERLSLPPYQQSVAAPIIK
EIVHRLDFLNQVGLDYVTLDRRGETLSGGELQRVRLAAGLGAVLSDVCYIVDEPSIGLHP
RDNDRLIASLRQLVDRGNTVIVVEHDEAIIRAADWVIDMGPGAGPAGGQVVAEGTVADIM
THPHSMTGRYLAGQEVIPIPTGRRQPQPGREIVLVGVTTNNLKNITVEFPLGLFICITGV
SGSGKSSLLSMTLAPALKRALLGLGSRGAGYQEIRGFENVDRVVDVDQTPIGRSPRSNVA
TYTGVFDEIRRVFATTRDARRLGFRADRFSFNNPAGRCPVCQGLGQQKIEMDFLPDMYVT
CPACLGRRFNPQTLEVRYRDKTIADVLEMSIEEALDFFENFPAIETVLRCLREVGLGYLQ
LGQKAVALSGGEAQRIKLATELARGRQGKTVYLLDEPTTGLHKDDVRRLLSVLHHLVDAG
NTVVVVEHHLDLIKSADWIIELGPEGGREGGNVVAMGTPEDLARHPNSPTGRYLAPILKR
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaaggatgagttgagcgtggaggcaactctcatcaatgtccgcggcgcgcgg
gttcacaatctcaaaaacgtggatgtttcgattccgcttggccgtctggtcgtgatcacc
ggtccgagcggttcggggaaaagctccctggcgtttgacacactccacgccgagggacag
cgccagtacctggagacactgacgccgcacctgcggcggttcattccacagctggaacgc
ccggatgtggattgggtggagggactaccgccgacggtggccatcgatcaacggggcggt
cccccaccacctcgaagcaccgtgggaactctcactgaagtgtatgacctcctgcgcctt
ctgtacgtgcgggtgggcgaactccagtgtcctaaatgtttggtgccggtcgtcagtcaa
tcgccccaggaaatctgtcaggcaattctgtcccttcccgaaggcacacgcctcatcctt
ttggctcctattccaatcaagaaatcgcgaaaggctccggaattagtggccacaatccgc
aaattggggttcccgcgggttcggcttaatgggcaattatgcgatctggacgacctcacg
cccaaaactctcgagggacagtgccgcgtggaagtagtggtcgaccgcgtgatcatcaag
cccgccgtcgaaacgcggctgcgtgaatcgcttcatacaaccctcagaatttcggatggg
caggcgattgtttcttacgaagttgcgggagaaggcggtgaacccgtttgggtggaccag
gttttcagcactgttcggcgttgctctcgctgcggtgaaatttaccccgaggtcgatctt
cgaactctcagctttttcagtcctcacggtgcgtgtccgcagtgcgagggccttggtgtg
gtggatcgatttgatcccaacctggtgatcgacttttcgcgaggattggaaaacggggcg
gtgcgactgtggaaagatgcccgcgctaaactgaagcatcatgcaaaaaagatcgagcga
ctcatgaagcagggcggatttgattggtcaacgccgctggaaaaaattcccgaagagttc
cgtgcaaagctcatttttggggcccgaccttccgatcagaattcggacagatccccggca
aattcacaacccacgcgtcgaacccgaagcacagaattcgtgggccttctccagcttctg
gaagtggaatatgagctgttggcagaagactggcagcggcgtgaatgggcggcgtatcgg
tcccaggtggcctgcccatcctgtcagggggcacgtctcggtgcgcttggacgctctgtg
atgatcgagggggtacccattcacgccctctgtgcatggacgattccagaggtgcgtgcc
tttctggaaaggctaagtcttccaccgtatcagcagagcgtggcagcgccgatcattaag
gagatcgtgcatcggttggattttctcaatcaggtgggactcgattatgtcacgctggat
agacggggcgaaaccttaagcgggggggaacttcagcgagtacgcttggcagccgggtta
ggcgccgtattaagcgacgtatgttacatcgtggatgagccatcgattgggcttcacccg
cgggacaatgaccgcctcattgccagcctccgtcaacttgtcgatcgtggaaacacggtc
atcgtggtggagcacgatgaagctatcatccgggcggcagactgggtgattgatatggga
cctggcgctggaccggctggaggacaggttgtcgcggagggaacggtggccgacatcatg
actcatccccactctatgacggggcgttaccttgccggccaggaggttattcccattccc
accgggcgtcgtcagccacaaccagggcgtgaaattgttctcgtaggggtcaccacgaac
aacctcaagaatatcacggttgaatttccgctcggactgtttatctgcatcacgggtgtg
agtggttctggaaagagctcgctcctcagtatgactcttgccccagccttaaaacgggcg
ctcctcggcctgggaagcaggggcgccggatatcaggaaatacggggcttcgaaaacgta
gacagggttgtggatgtcgatcaaacacccattggcaggtcgcctcgcagtaacgtggcg
acctatactggggtgtttgacgagatccgacgggtctttgccaccacacgtgatgcccgc
cgattaggatttcgggctgatcgattcagcttcaataatccggccggtcgctgtcccgta
tgccagggattggggcaacagaagatcgagatggattttttgcctgatatgtacgtgacc
tgcccggcgtgtctcggccgccgattcaatccccaaaccttggaggttcgttaccgggac
aagaccatcgccgacgtattggagatgtcgatagaggaagccctggacttcttcgaaaat
tttcccgccatcgaaacggttctgcgatgcctgcgggaggtcgggctgggctatcttcag
cttgggcaaaaagccgtggcgctgtcgggcggggaagcccagcgaatcaagctggcaacc
gagttggctcgaggacgccagggaaaaacggtgtaccttctcgacgagccgaccaccggc
cttcataaggatgacgtacggcggcttctctccgtgctgcatcacttggtcgacgcagga
aacactgtggtcgtggtggagcatcacctggacctgatcaaatcggccgactggattatc
gaactggggcccgaggggggccgcgaagggggcaacgtggtggcgatgggaacgcccgag
gatttagcccgtcatccgaacagccctaccggccgctatttggctccaattctaaaacgg
agctag
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