Thermogutta terrifontis: THTE_4405
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Entry
THTE_4405 CDS
T05034
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ttf
Thermogutta terrifontis
Pathway
ttf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THTE_4405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttf03021
]
THTE_4405
03019 Messenger RNA biogenesis [BR:
ttf03019
]
THTE_4405
Transcription machinery [BR:
ttf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
THTE_4405
Messenger RNA biogenesis [BR:
ttf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
THTE_4405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
Mor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASV77006
UniProt:
A0A286RM11
LinkDB
All DBs
Position
complement(4720690..4721946)
Genome browser
AA seq
418 aa
AA seq
DB search
MRSKNGQAQASDNKLEKNGSNGALVPQEQQSTSVQTVESAESNLYEGGGVLELHPSGYGF
LRDPAANYERRLTDPFVPGSMIEKYGLRQGVYIKGLVQPGKKGQGPRLREIHDVDGIPPQ
EYPKVKHFDELTPINPEEWLRLETGPEPITTRVMDLLTPIGKGQRALIVAPPRTGKTVLL
QHISLAIAQNYPDMKLIILLIDERPEEVTDFRRVCKNAEVVASSLDCEIESHVRLSQLIV
ERCKRLAEMGKDVFLLMDSITRLARAFNKWVGNTGRTMTGGIDVKAMDIPKKLFATARAF
EEGGSLTIVATALIDTGSRMDELIFQEFKGTGNMELVLDRRLADRRIWPAIDITQSGTRR
EEKLLPPEYLKAVTILRRMLSSMNPVEAMEQLTQKLAKYKSNQEFIELIAGAQAHAAG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccaagaacggacaagcccaggcttctgacaacaagctagagaagaatgggtcg
aacggagctcttgtcccgcaggaacagcaatccacttccgttcagaccgtggaatctgcg
gaaagcaacctctacgaagggggtggtgttctggagcttcaccccagcgggtacggcttt
ctgcgtgatccggccgccaattacgagcggcggctgacggatccttttgtccccggcagc
atgatcgagaagtacggcctgaggcagggtgtttacatcaaggggctggtgcagccgggt
aagaagggccagggaccgcgtctgcgggaaattcacgatgtggacgggattccgccccag
gaatatccgaaagtcaaacactttgacgaattgacgcccatcaatcccgaggaatggctg
cgtttggaaaccggtcctgagccgatcacgacgcgggtgatggacctgctgacgccgatc
gggaagggtcagcgggcgctcatcgtggcgccaccgcggacaggaaagacggtgctgctc
cagcatatcagtctggcgattgctcagaattatccggacatgaagctcatcattctgctg
atcgatgagcgtccggaggaggtgacggacttccgccgtgtgtgcaagaatgccgaggtg
gtggccagcagcctggactgtgaaatcgagagccacgtgcggctgtcgcagctcattgtg
gagcggtgcaagcgcctcgccgagatggggaaggacgtctttctcttgatggattcgatc
acccggctggcgcgtgcctttaacaaatgggtgggcaataccggccgcacgatgaccggc
ggtatcgacgtcaaggccatggacattccgaagaagctgtttgcgacggcccgggcattt
gaagagggcggatcgctgacgatcgtggcgaccgcgctgatcgacaccggcagccggatg
gatgaactcatctttcaggaattcaaagggaccggcaatatggagctggtgctcgatcgg
cggctggcggatcggcggatctggccggccattgacatcacccaatcgggcacgcggcgg
gaagagaagctgttgccgccagagtatctcaaggccgtgacgatcctgcggcgaatgctt
tccagcatgaatccggtggaggcgatggaacagctcacccagaagctggccaagtacaag
tccaatcaggagttcattgagcttatcgctggtgcccaggcccacgccgcggggtaa
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