Thermogutta terrifontis: THTE_4461
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Entry
THTE_4461 CDS
T05034
Name
(GenBank) Protein RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ttf
Thermogutta terrifontis
Brite
KEGG Orthology (KO) [BR:
ttf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttf03016
]
THTE_4461
Enzymes [BR:
ttf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
THTE_4461
Transfer RNA biogenesis [BR:
ttf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
THTE_4461
Prokaryotic type
tRNA splicing ligases
THTE_4461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ASV77062
UniProt:
A0A286RM75
LinkDB
All DBs
Position
complement(4768178..4769641)
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AA seq
487 aa
AA seq
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MSKEGFAGPLERIDETTWRIPPDYKPGMQVEGRIYADERLIEQIRKDQAPEQVANVATLP
GIQVASLAMPDIHWGYGFCIGGVAATDPEEGGVISPGGVGYDINCGVRLMRTNLHIDDVR
PRLSELMNVLFQRIPAGVGKGGPYLFSGKQMDQLLEEGCRYLKKIGLATEEDLKNTEEGG
CMAGADASCVSNEAKKRGSDQCGTLGAGNHFLEVQVVEEIFDPEAARIMGLEPGTICVMI
HSGSRGLGYQVCDDALQEMRRCPEKYHIQLPDRQLACAPINSPEGQRYLAGMRAAANYAW
ANRQLLMWQTREAFSEFFGKPWEELGMDLVYDVAHNIAKMEKHIVDGKEKLVCVHRKGAT
RAFPPGHPDVPERYRAIGQPVIIPGDMGRESWVLVGQPASMEKTFGTTCHGAGRVLSRNA
AIQVARGRQIDKELAAKGIIARAHSRAGLAEEHSDAYKDVSIVVDIVDRAGLAKKVARLR
PVGVVKG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaaggctttgctgggccgctcgaacgtatcgacgaaaccacctggcgaatc
ccgcccgattataaaccgggaatgcaggtcgaaggccgaatctatgccgacgaacggctc
atcgagcaaatccgcaaggatcaggctcccgagcaggtggccaacgtggcgaccctgccc
ggcatccaggttgccagtctggccatgccggacatccactggggttacggtttttgcatc
ggcggggtggccgccacagatccggaggaaggtggtgtcatttcgccgggtggggtgggg
tacgacatcaactgcggcgtccgtcttatgcggacgaatctccatattgacgatgttcgc
ccccgactgtccgaactcatgaatgttctgttccagcggattccggcaggggtgggcaaa
ggcgggccctatcttttttccggaaagcagatggaccagcttctggaagaagggtgccgg
tatctcaaaaagatcgggctggccaccgaggaggacctcaagaatacggaagaaggtggg
tgcatggcgggagccgacgcttcctgcgtgagtaacgaggccaaaaaacgtggcagcgac
cagtgcgggacgctgggggccggcaaccacttcctggaggtccaggtggtggaagaaatt
ttcgatcccgaagccgctcgcatcatggggttggagccgggaaccatctgcgtgatgatc
cactccggatcgcgcggcctcggctatcaggtgtgtgacgacgcactccaggaaatgcgg
cggtgcccagaaaaataccacatccagcttcccgaccggcagctcgcttgtgcccctatc
aatagtcccgaggggcagcgctatctggcggggatgcgggcggcagccaattacgcctgg
gccaatcgccagctcctcatgtggcaaacgcgagaggccttcagtgaattctttggcaag
ccctgggaggagctgggcatggacctcgtgtatgacgttgcccataacatcgccaaaatg
gaaaagcatatcgtcgatggcaaggaaaaacttgtgtgtgtgcatcgcaagggggcaacg
cgggcgttcccgccagggcatcccgacgttcccgagcggtatcgcgcaatcggccagccg
gtcatcatcccgggggacatgggccgggaaagctgggtcctggtgggccagccggcttcg
atggagaaaacattcggcaccacctgccacggggcgggacgcgtgctcagccgcaacgcc
gcgattcaggttgcccgcggtcgccagatcgataaagagctggcggccaagggaatcatc
gcccgggcgcacagccgggcgggactggcggaggagcactccgatgcctataaagatgtc
agcatcgtcgtggacatcgtggatcgcgcgggacttgccaagaaggtcgcccggctacgt
cctgtcggcgtggtcaagggataa
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