Tenacibaculum tangerinum: P8625_02565
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Entry
P8625_02565 CDS
T09624
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttg
Tenacibaculum tangerinum
Pathway
ttg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8625_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttg03019
]
P8625_02565
03400 DNA repair and recombination proteins [BR:
ttg03400
]
P8625_02565
Enzymes [BR:
ttg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8625_02565
Messenger RNA biogenesis [BR:
ttg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8625_02565
DNA repair and recombination proteins [BR:
ttg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8625_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WGH76067
UniProt:
A0ABY8L616
LinkDB
All DBs
Position
615331..617529
Genome browser
AA seq
732 aa
AA seq
DB search
MNREQTDLYGSLKKIFGFNQFKGLQEDVVNSVLNNKNTFVIMPTGGGKSLCYQLPALMKE
GTAIVVSPLIALMKNQVDAIRGISENQGIAHVLNSSLNKSEIAQVKSDIEAGITKLLYVA
PESLIKEEYAEFLRKQKISFVAIDEAHCISEWGHDFRPEYRNLKNIIKEIDNVPIIGLTA
TATEKVQEDILKTLGMTDANVFKASFNRPNLFYEVRPKTKDVEKDIIRFIKQRPGKSGII
YCLSRKKVEEIAQILQVNGINAVPYHAGLDAKTRVKHQDMFLMEDCEVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGYCLTFYSYKDIEKLEKFMANKPVAEQE
VGHALLQEVVGYAETSMNRRKYLLHYFGEEFDEVHGEGANMDDNMRNPKKKHEAKDEVVT
LLSVIRDTSEMYKPKEIVNTLIGKENALLKSHRTTEQPFFGIGKAKDNHYWMALIRQVLV
ADLIQKEIEQYGVLKLTKAGKEFINDPSSFMMTENHVYETADDGTIITNEKSAGGGVDDA
LVKMLKDLRKTVGKRLGVPPFAVFQDPSLDDMALKYPITLDELAKVHGVGEGKARKYGKD
FVALISKYVEDNDIMRPDDLIVKSTGVNSGLKLYIIQNTDRKLPLEDIAKSKGLEMSELI
KEMEAIVFSGTKLNIDYAVDDLLDEDQQEEIHEYFMEAETDKIQEALDEFDGDYDDDELR
LMRIKFTSEVAN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagagcagacggatttatatggatcattaaaaaaaatcttcggatttaaccag
tttaaaggactacaagaagatgtagtgaatagtgtattgaataataaaaatacatttgtt
atcatgccaactggtgggggtaaatcgctatgctatcagctccctgccttaatgaaagaa
ggcacagctattgtagtatcgccactcatagctctgatgaaaaatcaggtagatgccatc
agagggatttctgaaaatcaaggaatagcccatgtattaaactcttcgttgaacaagtca
gagatagcacaagtgaaatcagatattgaagcaggaattacaaaattgctatatgtagct
cctgaatctttaattaaagaagaatatgctgaatttctaagaaagcaaaaaatatcgttt
gtagcgattgatgaagcacattgtatttctgaatgggggcatgactttagacccgagtac
cgaaatctgaaaaatattatcaaggaaattgataacgtacctatcattggtttaactgca
actgcgaccgagaaagtacaagaagatattttaaaaactctcggaatgaccgatgccaat
gtttttaaagcatcgttcaacagacccaatttgttttatgaagtacgccctaaaacaaag
gacgtagaaaaagacattattcgttttataaaacaacgaccaggtaaatcaggaataatt
tattgtttaagccgtaaaaaagtagaagaaatagcacaaattttacaagttaacggtatc
aatgcagttccttatcacgcaggtttagatgccaaaacacgtgtaaagcatcaagatatg
ttcttgatggaagattgtgaagtggtggtagctaccattgcctttggtatgggaatagac
aaaccagatgttcgttttgtaatacaccacgatattccaaaaagtttagagagttattat
caagaaacaggtagagctggtcgtgatgggggagaaggttactgtttaacattctattcg
tataaagatattgaaaagcttgaaaaattcatggcgaataagccagtagccgaacaagaa
gtagggcatgcactgttgcaagaagttgtggggtatgcagaaacttcaatgaataggaga
aaatatttactgcattattttggagaagagtttgatgaagtacatggtgaaggggctaat
atggatgataacatgcgtaatccaaagaaaaagcacgaagccaaagatgaagtggtaacc
ttgctctctgtaattagagatacaagcgaaatgtataaaccaaaagaaattgtaaacacg
cttattggtaaagaaaatgccttattaaaatctcatagaacaaccgaacaaccttttttc
ggtataggtaaagcaaaagacaaccattattggatggctttgatccgacaagtattggtg
gctgatttgatacaaaaggaaatagaacaatacggagttttaaagcttaccaaagcagga
aaagagtttataaatgatccatcatcatttatgatgacagagaatcatgtatatgaaaca
gcagatgacggtacgattataaccaacgaaaagtcagcaggaggaggcgtagacgatgca
ttggtaaaaatgttgaaagaccttagaaaaactgttggaaaacgtttaggagtaccccca
tttgcagtttttcaagatccatctttagacgacatggcgcttaaatatccaattacatta
gatgaactagctaaagttcacggggttggagaaggaaaggcgagaaagtatggaaaagat
tttgtagcacttatttcaaaatacgtagaagataacgatatcatgcgtccagatgattta
attgtgaaaagtactggagtaaattcaggactaaaactatatattattcaaaataccgat
agaaaactacctctagaagatatagcaaagtctaaaggtttagaaatgtctgaattgata
aaagaaatggaagcgattgtattttctggaacgaagctaaacatcgattatgcagtagat
gacttgcttgatgaagaccagcaagaagaaatccatgagtattttatggaagcggaaaca
gataaaattcaagaagctttagatgagtttgatggagattatgacgatgatgagttacgc
ttaatgcgcattaaatttaccagtgaagtagccaactag
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