Tenacibaculum tangerinum: P8625_05610
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Entry
P8625_05610 CDS
T09624
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttg
Tenacibaculum tangerinum
Pathway
ttg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8625_05610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttg03019
]
P8625_05610
03400 DNA repair and recombination proteins [BR:
ttg03400
]
P8625_05610
Enzymes [BR:
ttg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8625_05610
Messenger RNA biogenesis [BR:
ttg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8625_05610
DNA repair and recombination proteins [BR:
ttg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8625_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WGH76636
UniProt:
A0ABY8L697
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All DBs
Position
1329843..1331450
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AA seq
535 aa
AA seq
DB search
MYDTALKILTHYWGHPSFREPQQEIITSVLNNKNVVALLPTGGGKSICFQIPALVKDGVC
IVVSPLIALMEDQVSNLIQKGIKATLLPSGSTQDEMITLFDNIRFGNIKFLYISPERLQS
QFIQEKIKQLHVNLIAIDEAHCISEWGHDFRPSYRNITILKELQPAAPVIALTATATQKV
ITDIVSSLELENPTLFRKSFFRENLAYQVIKTEDKLGKLNQIFTKTKAPAIVYVNTRKKT
QEISRYLNAQGYKSSFYHGGLSTIKKKLAFDNWMSEKTPIMVATNAFGMGIDKPNVRLVV
HLNVPSSIENYIQEAGRGGRDGVKSFAVMLTNNSDISLSSTLLEKSLPSIQEVKTVHQKL
YQYVQIAKGELVETGFDFNFLDFCNQYQFIPNKTFTTLQILNNNGIIELNHNFQQKSTIQ
FLASSTKVIAHATKNTTVKNFIQQILRMYGGIFETPVKIDEFYIAKKLGTTSWFVIDTLE
KLAQKELIAYTKATNNAELFFLQPREDDKTINRIAANIKQYIQQKKKKILIYFIS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacaccgctctaaaaatattgacccattattggggacacccttcttttagagaa
cctcaacaagaaattattacctcagttttaaacaataaaaacgttgttgccttactaccc
actggtggcggaaaatcgatttgttttcaaatacctgcattggttaaagacggagtttgt
attgttgtttctcctttaattgccctgatggaagatcaagtttctaacttaattcagaaa
ggtatcaaagcaaccctgctaccatcaggaagtacacaagatgaaatgataacgcttttt
gataatatcagatttggaaacatcaagtttttatacatttcgcccgaacgactacaatca
caatttattcaagaaaaaataaaacaactacatgtaaatttaattgcgattgatgaagcg
cattgtatttcggaatggggacatgattttcgaccttcttatcgaaatattaccatttta
aaagagctccaaccagcggctccagtaattgcattgacggctaccgctacccaaaaagta
attacagacattgtttcttctcttgaattagagaacccaaccctatttcgaaagtcattt
tttagagaaaatttggcttatcaagtaataaaaacagaagacaaactcggtaaactaaat
cagatttttaccaaaacaaaagcccctgcaatcgtatatgtaaatacacgaaagaaaacg
caagaaattagccgttatttgaatgcgcaggggtacaaaagttctttttatcatggcgga
ctttctactataaaaaaaaaactcgcctttgataactggatgtctgaaaaaacacccatt
atggttgccaccaatgcctttggtatgggaatcgacaaacccaatgttcgtctcgtagtt
catttaaacgtaccttcttctattgaaaactatattcaagaagcgggtcgtggcggacgt
gatggagtgaagtcttttgctgttatgctaaccaataatagcgatatttctttgagcagt
acattgctagaaaaatctttaccttctattcaagaagtaaaaactgtacatcaaaaacta
tatcaatatgtgcaaattgcaaaaggagaattggtagaaactgggtttgattttaacttt
ttagacttttgcaatcaataccaatttattcctaacaaaaccttcacgacacttcaaata
ctcaacaataacggaattatagaactcaaccataacttccagcaaaaatctaccattcag
tttttagcttcaagtacgaaagtgatagcacatgcaactaaaaatactaccgttaaaaac
tttattcaacaaattttgcgtatgtatggtggtatttttgaaacccctgtaaagattgat
gagttttatattgccaagaagctaggcacgacttcttggtttgtgattgatactttagaa
aaattggctcagaaagaattgattgcgtataccaaagctacgaataatgcggaactcttc
tttttacaacctagagaagatgacaaaaccatcaatcgaatcgctgccaatatcaaacaa
tacattcaacaaaaaaagaaaaaaatactgatttacttcatttcatag
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